Gene: Solyc11g064800.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g064800.3
  • Transcript Identifier Solyc11g064800.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 48035981-48040492 : negative

Gene Family Information

  • ID HOM05D000711
  • #Genes/#Species 809/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g064800.3.1
  • uniprot A0A3Q7IYL5
  • gene_id Solyc11g064800

Descriptions

  • Description Protein LATERAL ROOT PRIMORDIUM 1 (AHRD V3.3 *** A0A2G3B9J0_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
IBA
GOA Databasepositive regulation of transcription, DNA-templated
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G12330
GO:0048653
ISO
PLAZA Integrative Orthologyanther development AT5G12330
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G12330
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G12330

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IBA
GOA DatabaseDNA binding
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT5G12330
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G12330

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006511 SHORT INTERNODES, C-terminal
IPR006510 Zinc finger, lateral root primordium type 1
IPR007818 SHI protein family
Mapman id Description
15.5.45 RNA biosynthesis.transcriptional regulation.transcription factor (SRS)