Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0011012 PREDICTED: uncharacterized protein LOC102592443 [Solanum tuberosum] Contig672 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G16580 LG-8 - View
Aethionema arabicum Aa31LG2G20920 LG-2 - View
Acer truncatum Atru.chr7.1575 chr7 + View
Actinidia chinensis Actinidia25258 Lachesis_group18 + View
Arabidopsis lyrata AL3G48670 scaffold_3 + View
Arabidopsis lyrata AL7G22720 scaffold_7 - View
Avicennia marina MSTRG.6051 ScioBoG_102839_HRSCAF_103093 + View
Avicennia marina MSTRG.19521 ScioBoG_25048_HRSCAF_25167 - View
Amaranthus hybridus Ah.14g085250 Cytidine deaminase 1 (At-CDA1) (EC 3.5.4.5) AmaHy_arrow1_Scaffold_14 - View
Aquilegia oxysepala Aqoxy7G01240 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YN7FFH 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT2G19570 cytidine deaminase 1 Encodes a cytidine deaminase that deaminates cytidine and deoxycytidine and is competitively inhibited by cytosine-containing compounds. cytidine deaminase 1 (CDA1)%3B CONTAINS InterPro DOMAIN/s: Cytidine deaminase%2C homodimeric (InterPro:IPR006263)%2C APOBEC/CMP deaminase%2C zinc-binding (InterPro:IPR016192)%2C CMP/dCMP deaminase%2C zinc-binding (InterPro:IPR002125)%2C Cytidine deaminase-like (InterPro:IPR016193)%2C Cytidine/deoxycytidylate deaminase%2C zinc-binding domain (InterPro:IPR013171)%3B BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT4G29610.1)%3B Has 2638 Blast hits to 2526 proteins in 1057 species: Archae - 42%3B Bacteria - 2022%3B Metazoa - 110%3B Fungi - 58%3B Plants - 130%3B Viruses - 0%3B Other Eukaryotes - 276 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT4G29570 Cytidine/deoxycytidylate deaminase family protein Cytidine/deoxycytidylate deaminase family protein%3B FUNCTIONS IN: hydrolase activity%2C cytidine deaminase activity%2C catalytic activity%2C zinc ion binding%3B INVOLVED IN: cytidine deamination%2C cytidine metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: stamen%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Cytidine deaminase%2C homodimeric (InterPro:IPR006263)%2C APOBEC/CMP deaminase%2C zinc-binding (InterPro:IPR016192)%2C CMP/dCMP deaminase%2C zinc-binding (InterPro:IPR002125)%2C Cytidine deaminase-like (InterPro:IPR016193)%2C Cytidine/deoxycytidylate deaminase%2C zinc-binding domain (InterPro:IPR013171)%3B BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT4G29580.2)%3B Has 1057 Blast hits to 1055 proteins in 440 species: Archae - 0%3B Bacteria - 888%3B Metazoa - 0%3B Fungi - 0%3B Plants - 129%3B Viruses - 0%3B Other Eukaryotes - 40 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaB03g16745 ChrB03 - View
Brassica carinata BcaC06g36599 ChrC06 - View
Brassica carinata BcaC09g51742 ChrC09 + View
Brassica carinata BcaNung00481 Contig281 + View
Brassica napus C07p02310 C07 + View
Brassica napus C07p56970 C07 + View
Brassica napus C09p14740 C09 - View
Brassica napus A03p58990 A03 + View
Brassica napus A07p01170 A07 + View
Brassica oleracea BolC7t40640H C7 + View
Brassica oleracea BolC7t46172H C7 + View
Brassica oleracea BolC1t00943H C1 + View
Brassica rapa BraA03t14958Z A03 + View
Cannabis sativa CANSAT56G1065 NC_044371.1 + View
Cicer arietinum L. Ca_17403_v3 Ca_LG6_v3 + View
Cicer arietinum L. Ca_25622_v3 Ca_LG8_v3 + View
Corylus avellana Haze_25901 Similar to CDA1: Cytidine deaminase 1 (Arabidopsis thaliana OX%3D3702) 8 + View
Coffea canephora Cc06_g11280 Putative Cytidine deaminase chr6 + View
Citrus clementina Ciclev10008864m.g scaffold_1 + View
Carpinus fangiana Cfa003099 Cfa01 - View
Cardamine hirsuta CARHR237400 Cytidine deaminase Chr7 + View
Cardamine hirsuta CARHR110010 Cytidine deaminase Chr3 - View
Carya illinoinensis CiPaw.03G217400 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Chr03 - View
Citrullus lanatus ClCG03G015690 Cytidine deaminase CG_Chr03 - View
Cucumis melo MELO3C015459.2 Cytidine deaminase chr02 + View
Corchorus olitorius COL.COLO4_18213 CMP/dCMP deaminase%2C zinc-binding protein AWUE01016436.1 - View
Capsella rubella Carub.0007s1093 K01489 - cytidine deaminase (cdd, CDA) scaffold_7 - View
Capsella rubella Carub.0003s3386 K01489 - cytidine deaminase (cdd, CDA) scaffold_3 - View
Cucumis sativus L. CsaV3_1G040320 Cytidine deaminase chr1 + View
Davidia involucrata Dinv42311 GWHABJS00000013 + View
Davidia involucrata Dinv36756 GWHABJS00000001 + View
Durio zibethinus Duzib187G1696 NW_019167860.1 + View
Durio zibethinus Duzib168G0375 NW_019168159.1 - View
Erigeron canadensis ECA234G2307 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA240G2674 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.C00902 Chr03 - View
Erythranthe guttata Migut.J00599 scaffold_10 + View
Eutrema salsugineum Thhalv10026995m.g 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase scaffold_1 - View
Eutrema salsugineum Thhalv10023108m.g 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase scaffold_11 + View
Eutrema salsugineum Thhalv10002058m.g 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase scaffold_12 - View
Fragaria x ananassa FAN19G2283 K01489 - cytidine deaminase (cdd, CDA) Fvb1-4 + View
Fragaria x ananassa FAN28G1682 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Fvb1-1 - View
Fragaria x ananassa FAN26G3264 K01489 - cytidine deaminase (cdd, CDA) Fvb1-2 - View
Fragaria x ananassa FAN26G1922 K01489 - cytidine deaminase (cdd, CDA) Fvb1-2 - View
Fragaria x ananassa FAN23G1917 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Fvb1-3 + View
Fragaria vesca FvH4_1g07230 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Fvb1 + View
Gossypium hirsutum Gohir.D05G030900 K01489 - cytidine deaminase (cdd, CDA) D05 + View
Gossypium hirsutum Gohir.A05G029400 K01489 - cytidine deaminase (cdd, CDA) A05 + View
Gossypium hirsutum Gohir.D13G199300 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase D13 - View
Gossypium hirsutum Gohir.A13G193500 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase A13 - View
Glycine max Glyma.05G222300 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Gm05 - View
Glycine max Glyma.08G029000 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Gm08 - View
Glycine max Glyma.07G129300 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Gm07 + View
Gossypium raimondii Gorai.009G031100 Chr09 + View
Gossypium raimondii Gorai.013G228000 Chr13 - View
Helianthus annuus HanXRQChr10g0319261 Probable cytidine deaminase 1 HanXRQChr10 + View
Lupinus albus Lalb_Chr05g0223631 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Lalb_Chr05 + View
Lupinus albus Lalb_Chr24g0393781 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Lalb_Chr24 - View
Lotus japonicus Lj2g0012329 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase chr2 - View
Lotus japonicus Lj4g0006501 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase chr4 + View
Lonicera japonica Lj7P674T24 GWHAAZE00000007 + View
Lactuca sativa Lsat_1_v5_gn_7_37501 Lsat_1_v8_lg_7 - View
Lactuca sativa Lsat_1_v5_gn_5_145481 Lsat_1_v8_lg_5 - View
Malus domestica MD02G1076800 cytidine deaminase 1 Chr02 + View
Malus domestica MD15G1205500 cytidine deaminase 1 Chr15 + View
Medicago truncatula Medtr6g092660 homotetrameric cytidine deaminase chr6 + View
Medicago truncatula Medtr8g101570 homotetrameric cytidine deaminase chr8 - View
Nelumbo nucifera Nn6g35445 chr6 + View
Nelumbo nucifera Nn8g38896 chr8 - View
Punica granatum PGR142G4167 NC_045128.1 + View
Prunus persica Prupe.7G211600 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Pp07 - View
Pisum sativum Psat7g020200 Cytidine and deoxycytidylate deaminase zinc-binding region chr7LG7 + View
Pisum sativum Psat1g050280 Cytidine and deoxycytidylate deaminase zinc-binding region chr1LG6 + View
Populus trichocarpa Potri.006G150600 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Chr06 + View
Phaseolus vulgaris Phvul.002G304000 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Chr02 - View
Quercus lobata QL02p062866 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0093131 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim03G0233200 chr03 - View
Striga asiatica SGA_v2.0_scaffold62G21599 scaffold62 + View
Salvia bowleyana SalBow6G4675 GWHASIU00000002 - View
Salix brachista Sabra06G0119300 GWHAAZH00000006 + View
Simmondsia chinensis Sc08g0008410 GWHAASQ00000008 + View
Sechium edule Sed0008525 LG12 - View
Schrenkiella parvula Sp3g32950 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase ch3-6 - View
Schrenkiella parvula Sp7g27420 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase ch7-5 + View
Trochodendron aralioides TAR383G0148 group10 + View
Trochodendron aralioides TAR626G1007 group3 - View
Theobroma cacao Thecc.09G091100 Cytidine deaminase Chromosome_9 - View
Tarenaya hassleriana THA.LOC104803976 cytidine deaminase 1-like NW_010971389.1 - View
Trifolium pratense TPR.G35502 Tp57577_TGAC_v2_LG5 + View
Trifolium pratense TPR.G25452 Tp57577_TGAC_v2_scaf_162 + View
Tripterygium wilfordii TWI32G1006 NC_052254.1 + View
Tripterygium wilfordii TWI34G0516 NC_052235.1 - View
Vaccinium macrocarpon vmacro06284 Similar to CDA1: Cytidine deaminase 1 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G0329 CM024069.1 - View
Vigna mungo VMungo0464G1479 CM024077.1 + View
Vitis vinifera GSVIVG01015216001 chr11 - View