Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0025494 hypothetical protein POPTR_0004s18610g [Populus trichocarpa] Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.3467 chr5 - View
Actinidia chinensis Actinidia18028 Lachesis_group12 + View
Actinidia chinensis Actinidia20540 Lachesis_group25 + View
Arabidopsis lyrata AL7G10320 scaffold_7 + View
Avicennia marina MSTRG.19964 ScioBoG_26180_HRSCAF_26306 + View
Avicennia marina MSTRG.27627 ScioBoG_94932_HRSCAF_95134 + View
Amaranthus hybridus Ah.01g023380 Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic AmaHy_arrow1_Scaffold_1 - View
Arabidopsis thaliana AT4G38460 geranylgeranyl reductase geranylgeranyl reductase (GGR)%3B INVOLVED IN: isoprenoid biosynthetic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446)%2C Terpenoid synthase (InterPro:IPR008949)%2C Polyprenyl synthetase (InterPro:IPR000092)%3B BEST Arabidopsis thaliana protein match is: geranylgeranyl pyrophosphate synthase 1 (TAIR:AT4G36810.1)%3B Has 14555 Blast hits to 14554 proteins in 2890 species: Archae - 343%3B Bacteria - 9127%3B Metazoa - 134%3B Fungi - 165%3B Plants - 435%3B Viruses - 12%3B Other Eukaryotes - 4339 (source: NCBI BLink). Chr4 + View
Beta vulgaris EL10Ac9g21321 PTHR12001:SF41 - HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC Chr9_EL10_PGA_scaffold8 + View
Corylus avellana Haze_02082 Similar to GGR: Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic (Arabidopsis thaliana OX%3D3702) 1 + View
Citrus clementina Ciclev10030419m.g scaffold_8 + View
Cardamine hirsuta CARHR294180 Geranylgeranyl pyrophosphate synthase 4 scaffold1271 + View
Carya illinoinensis CiPaw.06G119100 PTHR12001//PTHR12001:SF41 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE // HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC Chr06 + View
Carya illinoinensis CiPaw.05G086600 PTHR12001//PTHR12001:SF41 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE // HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC Chr05 - View
Citrullus lanatus ClCG02G003810 Geranylgeranyl-diphosphate synthase CG_Chr02 - View
Cucumis melo MELO3C013320.2 Geranylgeranyl pyrophosphate synthase family protein chr01 - View
Carica papaya Cpa.g.sc20.129 supercontig_20 - View
Chenopodium quinoa AUR62009997 GGR: Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic C_Quinoa_Scaffold_1257 + View
Chenopodium quinoa AUR62012985 GGR: Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic C_Quinoa_Scaffold_1040 + View
Capsella rubella Carub.0007s0034 PTHR12001//PTHR12001:SF41 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE // HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC scaffold_7 + View
Cucumis sativus L. CsaV3_7G001340 Geranylgeranyl pyrophosphate synthase chr7 + View
Daucus carota DCAR_022830 geranylgeranyl pyrophosphate synthase DCARv2_Chr6 + View
Davidia involucrata Dinv14140 GWHABJS00000005 + View
Davidia involucrata Dinv41905 GWHABJS00000002 - View
Durio zibethinus Duzib132G0893 NW_019167915.1 + View
Durio zibethinus Duzib248G0246 NW_019168048.1 - View
Eucalyptus grandis Eucgr.G01806 Chr07 - View
Erythranthe guttata Migut.N01338 scaffold_14 - View
Eutrema salsugineum Thhalv10025662m.g PTHR12001:SF41 - HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC scaffold_1 + View
Fragaria x ananassa FAN15G3330 PTHR12001//PTHR12001:SF41 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE // HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC Fvb2-4 + View
Fragaria x ananassa FAN20G2192 PTHR12001:SF41 - HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC Fvb2-3 - View
Fragaria x ananassa FAN27G2843 PTHR12001:SF41 - HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC Fvb2-1 - View
Fragaria vesca FvH4_2g15810 PTHR12001:SF41 - HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC Fvb2 - View
Gossypium hirsutum Gohir.A01G171400 PTHR12001//PTHR12001:SF41 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE // HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC A01 - View
Gossypium hirsutum Gohir.D01G162400 PTHR12001//PTHR12001:SF41 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE // HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC D01 - View
Gossypium raimondii Gorai.002G201300 Chr02 - View
Hydrangea macrophylla Hma1.2p1_0163F.1_g072840 Hma1.2p1_0163F.1 - View
Hydrangea macrophylla Hma1.2p1_0032F.1_g019050 Hma1.2p1_0032F.1 + View
Lonicera japonica Lj9A402G70 GWHAAZE00000009 - View
Lonicera japonica Lj5A175G91 GWHAAZE00000005 + View
Malus domestica MD05G1127100 geranylgeranyl reductase Chr05 - View
Manihot esculenta Manes.11G098400 Chromosome11 - View
Nelumbo nucifera Nn5g30868 chr5 - View
Olea europaea Oeu045086.1 chr16 + View
Olea europaea Oeu028954.1 chr5 + View
Punica granatum PGR042G1234 NC_045130.1 + View
Prunus persica Prupe.8G170800 PTHR12001:SF41 - HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC Pp08 - View
Papaver somniferum PSO210G7766 NC_039359.1 - View
Papaver somniferum PSO170G4861 NC_039360.1 - View
Populus trichocarpa Potri.009G139600 PTHR12001//PTHR12001:SF41 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE // HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC Chr09 - View
Populus trichocarpa Potri.004G179628 PTHR12001//PTHR12001:SF41 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE // HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC Chr04 - View
Quercus lobata QL11p052645 11 - View
Rosa chinensis RcHm_v2.0_Chr6g0279181 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim11G0194700 chr11 - View
Striga asiatica SGA_v2.0_scaffold80G25832 scaffold80 + View
Salvia bowleyana SalBow5G3822 GWHASIU00000003 - View
Salvia bowleyana SalBow1G3734 GWHASIU00000001 + View
Salix brachista Sabra09G0108100 GWHAAZH00000009 - View
Simmondsia chinensis Sc14g0002350 GWHAASQ00000014 - View
Sechium edule Sed0003608 LG04 + View
Sechium edule Sed0010851 LG05 + View
Schrenkiella parvula Sp7g37320 PTHR12001//PTHR12001:SF41 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE // HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC ch7-6 - View
Selenicereus undatus Hund00007 Scaffold_33678 + View
Trochodendron aralioides TAR625G1020 group4 + View
Theobroma cacao Thecc.02G053000 Geranylgeranyl reductase Chromosome_2 + View
Vaccinium macrocarpon vmacro02300 Similar to GGR: Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View