Gene: SGA_v2.0_scaffold80G25832

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold80G25832
  • Transcript Identifier SGA_v2.0_scaffold80T25832
  • Gene Type Coding gene
  • Location scaffold80 : 924090-932375 : positive

Gene Family Information

  • ID HOM05D000626
  • #Genes/#Species 914/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Geranylgeranyl pyrophosphate synthase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008299
IEA
InterProisoprenoid biosynthetic process
GO:0006334
IEA
InterPronucleosome assembly
GO:0043693
ISO
PLAZA Integrative Orthologymonoterpene biosynthetic process AT4G38460

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G38460
GO:0004161
ISO
PLAZA Integrative Orthologydimethylallyltranstransferase activity AT4G38460
GO:0004311
ISO
PLAZA Integrative Orthologyfarnesyltranstransferase activity AT4G38460

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
InterPronucleosome
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G38460
GO:0042651
ISO
PLAZA Integrative Orthologythylakoid membrane AT4G38460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000092 Polyprenyl synthetase
IPR022059 Protein of unknown function DUF3615
IPR036390 Winged helix DNA-binding domain superfamily
IPR005818 Linker histone H1/H5, domain H15
IPR008949 Isoprenoid synthase domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
12.1.2.1 Chromatin organisation.chromatin structure.DNA bridging.linker histone (H1)
9.1.3.1.2 Secondary metabolism.terpenoids.isoprenyl diphosphate biosynthesis.geranyl diphosphate synthase complex.regulatory subunit SSU/IDS12
9.1.3.3 Secondary metabolism.terpenoids.isoprenyl diphosphate biosynthesis.isoprenyl diphosphate synthase (IDS)