Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0028585 PREDICTED: autophagy-related protein 8d [Populus euphratica] Chr7 - View
CSS0047563 PREDICTED: autophagy-related protein 8C-like isoform X3 [Elaeis guineensis] Chr8 - View
CSS0022521 autophagy 8b [Petunia x hybrida] Contig936 + View
CSS0049783 PREDICTED: autophagy-related protein 8C [Sesamum indicum] Chr7 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G3930 LG-6 + View
Aethionema arabicum Aa31LG9G9760 LG-9 + View
Acer truncatum Atru.chr6.3191 chr6 + View
Acer truncatum Atru.chr10.2235 chr10 + View
Actinidia chinensis Actinidia26910 Lachesis_group0 - View
Actinidia chinensis Actinidia11854 Lachesis_group6 + View
Actinidia chinensis Actinidia05511 Lachesis_group20 - View
Arabidopsis lyrata AL7G31720 scaffold_7 - View
Arabidopsis lyrata AL2G13870 scaffold_2 - View
Avicennia marina MSTRG.15991 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.7206 ScioBoG_102840_HRSCAF_103099 - View
Amaranthus hybridus Ah.09g234840 Autophagy-related protein 8A (Autophagy-related ubiquitin-like modifier ATG8A) AmaHy_arrow1_Scaffold_9 - View
Aquilegia oxysepala Aqoxy1G02112 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8SMT51 PF02991//PF04110 - Autophagy protein Atg8 ubiquitin like (Atg8) // Ubiquitin-like autophagy protein Apg12 (APG12) arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JD54WY K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EXRI64 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZFW017 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CQM6UK K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) arahy.Tifrunner.gnm1.Arahy.14 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IDQ1YW K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) arahy.Tifrunner.gnm1.Arahy.04 + View
Arabidopsis thaliana AT4G04620 Ubiquitin-like superfamily protein autophagy 8b (ATG8B)%3B CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2)%3B Has 1515 Blast hits to 1513 proteins in 273 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 720%3B Fungi - 178%3B Plants - 303%3B Viruses - 3%3B Other Eukaryotes - 311 (source: NCBI BLink). autophagy 8b (ATG8B)%3B CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2)%3B Has 1518 Blast hits to 1516 proteins in 273 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 723%3B Fungi - 178%3B Plants - 303%3B Viruses - 3%3B Other Eukaryotes - 311 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT1G62040 Ubiquitin-like superfamily protein autophagy 8c (ATG8C)%3B CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT2G05630.1)%3B Has 1515 Blast hits to 1513 proteins in 273 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 720%3B Fungi - 178%3B Plants - 302%3B Viruses - 3%3B Other Eukaryotes - 312 (source: NCBI BLink). autophagy 8c (ATG8C)%3B FUNCTIONS IN: microtubule binding%3B INVOLVED IN: autophagy%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G21980.2). Chr1 + View
Brassica carinata BcaC02g10514 ChrC02 - View
Brassica carinata BcaC03g16240 ChrC03 + View
Brassica carinata BcaC04g21316 ChrC04 - View
Brassica carinata BcaB01g01823 ChrB01 - View
Brassica carinata BcaNung00821 Contig365 - View
Brassica carinata BcaC06g31877 ChrC06 + View
Brassica napus A03p53170 A03 + View
Brassica napus C01p16080 C01 + View
Brassica napus C07p51540 C07 + View
Brassica napus C04p28030 C04 + View
Brassica napus A01p13360 A01 + View
Brassica napus A03p67430 A03 + View
Brassica oleracea BolC4t24348H C4 + View
Brassica oleracea BolC9t56156H C9 + View
Brassica oleracea BolC7t45652H C7 + View
Brassica oleracea BolC1t01568H C1 + View
Brassica oleracea BolC3t20669H C3 + View
Brassica rapa BraA01t01279Z A01 + View
Brassica rapa BraA09t38184Z A09 + View
Beta vulgaris EL10Ac4g07791 PTHR10969//PTHR10969:SF43 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED // AUTOPHAGY-RELATED PROTEIN 8A-RELATED Chr4_EL10_PGA_scaffold1 - View
Beta vulgaris EL10Ac8g20066 PTHR10969//PTHR10969:SF43 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED // AUTOPHAGY-RELATED PROTEIN 8A-RELATED Chr8_EL10_PGA_scaffold4 + View
Capsicum annuum CAN.G337.142 PGAv.1.6.scaffold337 + View
Capsicum annuum CAN.G404.61 PGAv.1.6.scaffold404 + View
Capsicum annuum CAN.G569.4 PGAv.1.6.scaffold569 - View
Cicer arietinum L. Ca_00665_v3 Ca_LG1_v3 + View
Corylus avellana Haze_06806 Similar to ATG8CL: Autophagy-related protein 8C-like (Solanum tuberosum OX%3D4113) 2 + View
Corylus avellana Haze_09695 Similar to POPTRDRAFT_833824: CASP-like protein 2D1 (Populus trichocarpa OX%3D3694) 4 + View
Coffea canephora Cc05_g04390 Autophagy-related protein 8C chr5 - View
Coffea canephora Cc05_g13910 Autophagy-related protein 8A chr5 + View
Coffea canephora Cc09_g01620 Autophagy-related protein 8C chr9 - View
Citrus clementina Ciclev10017018m.g scaffold_2 + View
Citrus clementina Ciclev10009926m.g scaffold_1 + View
Citrus clementina Ciclev10017176m.g scaffold_2 + View
Carpinus fangiana Cfa020328 Cfa08 - View
Carpinus fangiana Cfa014393 Cfa06 - View
Cardamine hirsuta CARHR252910 Autophagy-related protein 8a Chr8 + View
Cardamine hirsuta CARHR050150 Autophagy-related protein 8c Chr2 - View
Cardamine hirsuta CARHR228790 Autophagy-related protein 8a Chr7 + View
Carya illinoinensis CiPaw.10G071600 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Chr10 + View
Carya illinoinensis CiPaw.11G191000 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Chr11 + View
Citrullus lanatus ClCG03G004680 Autophagy-related protein CG_Chr03 - View
Citrullus lanatus ClCG01G021950 Autophagy-related protein CG_Chr01 - View
Cucumis melo MELO3C007393.2 Autophagy-related protein chr08 + View
Cucumis melo MELO3C019271.2 Autophagy-related protein chr11 + View
Cucumis melo MELO3C002452.2 Autophagy-related protein chr12 + View
Carica papaya Cpa.g.sc87.80 supercontig_87 + View
Carica papaya Cpa.g.sc12.293 supercontig_12 - View
Carica papaya Cpa.g.sc152.20 supercontig_152 + View
Chenopodium quinoa AUR62012715 ATG8B: Autophagy-related protein 8B C_Quinoa_Scaffold_2715 + View
Chenopodium quinoa AUR62021940 ATG8C: Autophagy-related protein 8C C_Quinoa_Scaffold_1862 - View
Capsella rubella Carub.0002s0298 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED scaffold_2 - View
Capsella rubella Carub.0006s3246 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED scaffold_6 - View
Capsella rubella Carub.0007s1936 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_6G049010 Autophagy-related protein chr6 - View
Cucumis sativus L. CsaV3_1G010710 Autophagy-related protein chr1 - View
Davidia involucrata Dinv20057 GWHABJS00000020 + View
Davidia involucrata Dinv22256 GWHABJS00000001 + View
Davidia involucrata Dinv05427 GWHABJS00000013 - View
Davidia involucrata Dinv13898 GWHABJS00000016 + View
Durio zibethinus Duzib192G0656 NW_019168037.1 - View
Durio zibethinus Duzib235G1302 NW_019167982.1 + View
Erigeron canadensis ECA236G4995 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.D01326 Chr04 + View
Eucalyptus grandis Eucgr.E04051 Chr05 + View
Erythranthe guttata Migut.M01748 scaffold_13 - View
Eutrema salsugineum Thhalv10029077m.g K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) scaffold_3 + View
Eutrema salsugineum Thhalv10026531m.g scaffold_1 - View
Eutrema salsugineum Thhalv10009130m.g scaffold_5 - View
Eutrema salsugineum Thhalv10023763m.g K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) scaffold_8 - View
Fragaria x ananassa FAN14G4418 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Fvb6-1 + View
Fragaria x ananassa FAN11G1866 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Fvb3-4 - View
Fragaria x ananassa FAN21G2095 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Fvb3-2 + View
Fragaria x ananassa FAN16G3449 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Fvb3-3 + View
Fragaria x ananassa FAN09G2304 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Fvb6-2 + View
Fragaria x ananassa FAN25G2162 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Fvb3-1 + View
Fragaria x ananassa FAN05G3493 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Fvb6-3 + View
Fragaria x ananassa FAN25G2011 PF04110//PF04535 - Ubiquitin-like autophagy protein Apg12 (APG12) // Domain of unknown function (DUF588) (DUF588) Fvb3-1 - View
Fragaria vesca FvH4_6g43130 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Fvb6 - View
Fragaria vesca FvH4_3g01980 PTHR10969//PTHR10969:SF43 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED // AUTOPHAGY-RELATED PROTEIN 8A-RELATED Fvb3 - View
Fragaria vesca FvH4_3g22920 PTHR10969//PTHR10969:SF43 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED // AUTOPHAGY-RELATED PROTEIN 8A-RELATED Fvb3 + View
Gossypium hirsutum Gohir.A10G012500 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED A10 - View
Gossypium hirsutum Gohir.D10G012000 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED D10 - View
Gossypium hirsutum Gohir.A05G170800 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED A05 + View
Gossypium hirsutum Gohir.D05G173800 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED D05 + View
Glycine max Glyma.07G261000 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Gm07 + View
Glycine max Glyma.09G003900 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Gm09 + View
Glycine max Glyma.15G108200 PF02991//PF04110 - Autophagy protein Atg8 ubiquitin like (Atg8) // Ubiquitin-like autophagy protein Apg12 (APG12) Gm15 + View
Glycine max Glyma.12G098400 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Gm12 - View
Glycine max Glyma.17G013000 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Gm17 - View
Gossypium raimondii Gorai.009G179100 Chr09 + View
Gossypium raimondii Gorai.011G013500 Chr11 - View
Helianthus annuus HanXRQChr05g0129481 Putative autophagy protein Atg8 ubiquitin-like; Ubiquitin-related domain HanXRQChr05 - View
Hydrangea macrophylla Hma1.2p1_0036F.1_g023560 Hma1.2p1_0036F.1 - View
Hydrangea macrophylla Hma1.2p1_0091F.1_g046440 Hma1.2p1_0091F.1 + View
Lupinus albus Lalb_Chr13g0304231 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Lalb_Chr13 + View
Lupinus albus Lalb_Chr18g0056401 PF02991 - Autophagy protein Atg8 ubiquitin like (Atg8) Lalb_Chr18 + View
Lupinus albus Lalb_Chr20g0118681 PF02991 - Autophagy protein Atg8 ubiquitin like (Atg8) Lalb_Chr20 + View
Lupinus albus Lalb_Chr15g0087641 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Lalb_Chr15 + View
Lotus japonicus Lj3g0012535 PTHR10969//PTHR10969:SF43 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED // AUTOPHAGY-RELATED PROTEIN 8A-RELATED chr3 - View
Lotus japonicus Lj6g0002314 PTHR10969//PTHR10969:SF43 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED // AUTOPHAGY-RELATED PROTEIN 8A-RELATED chr6 + View
Lactuca sativa Lsat_1_v5_gn_7_16200 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Lsat_1_v8_lg_7 - View
Magnolia biondii MBI02_g21888_MAGBIO AED:0.02 Chr02 + View
Malus domestica MD03G1199200 Ubiquitin-like superfamily protein Chr03 - View
Malus domestica MD11G1216100 Ubiquitin-like superfamily protein Chr11 - View
Malus domestica MD17G1097800 Ubiquitin-like superfamily protein Chr17 + View
Manihot esculenta Manes.16G006500 Chromosome16 - View
Manihot esculenta Manes.17G026600 Chromosome17 - View
Manihot esculenta Manes.03G130800 Chromosome03 + View
Manihot esculenta Manes.15G070700 Chromosome15 - View
Medicago truncatula Medtr2g023430 gaba-receptor-associated protein ubiquitin domain protein chr2 + View
Nelumbo nucifera Nn1g07146 chr1 + View
Olea europaea Oeu002742.2 chr10 - View
Olea europaea Oeu013631.2 chr6 - View
Oryza sativa ssp. japonica Os08g0191600 Core autophagy gene, Nitrogen use efficiency and yield chr08 + View
Oryza sativa ssp. japonica Os07g0512200 Core component of an autophagy gene, Nitrogen use efficiency and yield chr07 - View
Punica granatum PGR004G0850 NC_045131.1 + View
Punica granatum PGR083G2211 NC_045133.1 - View
Prunus persica Prupe.4G215300 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Pp04 + View
Prunus persica Prupe.4G019800 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Pp04 - View
Prunus persica Prupe.3G216800 K08341 - GABA(A) receptor-associated protein (GABARAP, ATG8, LC3) Pp03 - View
Pisum sativum Psat1g180080 Autophagy protein Atg8 ubiquitin like chr1LG6 - View
Papaver somniferum PSO832G2968 NC_039367.1 + View
Papaver somniferum PSO210G1819 NC_039359.1 + View
Populus trichocarpa Potri.004G013700 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Chr04 - View
Populus trichocarpa Potri.014G153800 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Chr14 + View
Populus trichocarpa Potri.011G004300 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Chr11 + View
Phaseolus vulgaris Phvul.003G079300 PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Chr03 + View
Phaseolus vulgaris Phvul.006G149640 Chr06 - View
Quercus lobata QL08p033000 8 - View
Quercus lobata QL05p073035 5 - View
Rosa chinensis RcHm_v2.0_Chr5g0002891 RcHm_v2.0_Chr5 - View
Rosa chinensis RcHm_v2.0_Chr2g0159191 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim06G0218400 chr06 + View
Rhododendron simsii Rhsim02G0106700 chr02 - View
Rhododendron simsii Rhsim13G0153400 chr13 - View
Striga asiatica SGA_v2.0_scaffold7G03832 scaffold7 - View
Striga asiatica SGA_v2.0_scaffold4G01910 scaffold4 - View
Salvia bowleyana SalBow8G3254 GWHASIU00000004 - View
Salix brachista Sabra04G0006500 GWHAAZH00000004 - View
Salix brachista Sabra11G0003400 GWHAAZH00000011 + View
Simmondsia chinensis Sc17g0007410 GWHAASQ00000017 + View
Sechium edule Sed0000951 LG08 + View
Sechium edule Sed0016583 LG01 + View
Sechium edule Sed0009992 LG14 - View
Solanum lycopersicum Solyc07g064680.3 Autophagy-related protein (AHRD V3.3 *** A0A2G3C2V6_CAPCH) SL4.0ch07 + View
Schrenkiella parvula Sp6g04260 PTHR10969//PTHR10969:SF43 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED // AUTOPHAGY-RELATED PROTEIN 8A-RELATED ch6-1 + View
Schrenkiella parvula Sp2g02520 PTHR10969//PTHR10969:SF43 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED // AUTOPHAGY-RELATED PROTEIN 8A-RELATED ch2-2 - View
Solanum pennellii Sopen02g025290 autophagy 8c (ATG8C) | FUNCTIONS IN: microtubule binding | INVOLVED IN: autophagy | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) | BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein ., Autophagy protein Atg8 ubiquitin-like Spenn-ch02 + View
Solanum pennellii Sopen07g032880 autophagy 8c (ATG8C) | FUNCTIONS IN: microtubule binding | INVOLVED IN: autophagy | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) | BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein ., Autophagy protein Atg8 ubiquitin-like Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400016479 Gaba(A) receptor-associated protein ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG402022314 Gaba(A) receptor-associated protein ST4.03ch07 + View
Selenicereus undatus Hund23235 Scaffold_33680 - View
Selenicereus undatus Hund21412 Scaffold_33680 - View
Trochodendron aralioides TAR627G0344 group6 + View
Trochodendron aralioides TAR626G0371 group3 + View
Trochodendron aralioides TAR624G1102 group9 - View
Trochodendron aralioides TAR629G2679 group0 - View
Theobroma cacao Thecc.06G221600 Ubiquitin-like superfamily protein Chromosome_6 + View
Tarenaya hassleriana THA.LOC104813143 autophagy-related protein 8a isoform X1 NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104818791 autophagy-related protein 8C NW_010960187.1 - View
Tripterygium wilfordii TWI63G0504 NC_052240.1 - View
Tripterygium wilfordii TWI36G0710 NC_052237.1 + View
Tripterygium wilfordii TWI38G1799 NC_052252.1 + View
Tripterygium wilfordii TWI75G0927 NC_052253.1 + View
Vaccinium macrocarpon vmacro02228 Similar to ATG8CL: Autophagy-related protein 8C-like (Solanum tuberosum OX%3D4113) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0540G2285 CM024075.1 + View
Vigna mungo VMungo1215G1635 CM024074.1 - View
Vitis vinifera GSVIVG01012719001 chr10 - View
Vitis vinifera GSVIVG01037666001 chr19 + View
Vitis vinifera GSVIVG01030430001 chr12 + View
Zea mays Zm00001eb105850 Zm00001e010463 Autophagy-related protein Autophagy-related protein 8a 2 - View