Gene: vmacro02228
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro02228
- Transcript Identifier vmacro02228-RA
- Gene Type Coding gene
- Location chr1_Vaccinium_macrocarpon_Stevens_v1 : 4185247-4188191 : negative
Gene Family Information
- ID HOM05D000698
- #Genes/#Species 816/99
- Phylogenetic origin
- ID ORTHO05D000839
- #Genes/#Species 588/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id vmacro02228_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to ATG8CL: Autophagy-related protein 8C-like (Solanum tuberosum OX=4113)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000045 | ISO | PLAZA Integrative Orthology | autophagosome assembly | PGSC0003DMG402022314 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | PGSC0003DMG402022314 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G05630 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009705 | ISO | PLAZA Integrative Orthology | plant-type vacuole membrane | PGSC0003DMG402022314 |
| GO:0005856 | ISO | PLAZA Integrative Orthology | cytoskeleton | PGSC0003DMG402022314 |
| GO:0000421 | ISO | PLAZA Integrative Orthology | autophagosome membrane | PGSC0003DMG402022314 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.3.3.4.1 | Protein homeostasis.autophagy.phagophore expansion.ATG8-phosphatidylethanolamine conjugation system.ubiquitin-fold protein (ATG8) |