Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Actinidia chinensis | Actinidia25498 | Lachesis_group1 | - | View | |
Actinidia chinensis | Actinidia18275 | Lachesis_group13 | + | View | |
Avicennia marina | MSTRG.11211 | ScioBoG_14204_HRSCAF_14270 | + | View | |
Avicennia marina | MSTRG.22830 | ScioBoG_3703_HRSCAF_3719 | + | View | |
Avicennia marina | MSTRG.9384 | ScioBoG_12795_HRSCAF_12848 | + | View | |
Amaranthus hybridus | Ah.11g047260 | 4-coumarate--CoA ligase-like 7 (EC 6.2.1.-) (4-coumarate--CoA ligase isoform 6) (At4CL6) | AmaHy_arrow1_Scaffold_11 | + | View |
Capsicum annuum | CAN.G1008.26 | PGAv.1.6.scaffold1008 | - | View | |
Coffea canephora | Cc04_g05510 | 4-coumarate--CoA ligase 1 | chr4 | - | View |
Citrus clementina | Ciclev10025280m.g | scaffold_7 | - | View | |
Carpinus fangiana | Cfa004162 | Cfa01 | - | View | |
Daucus carota | DCAR_021385 | 4-Coumaric acid: CoA ligase | DCARv2_Chr6 | + | View |
Daucus carota | DCAR_025617 | 4-Coumaric acid: CoA ligase | DCARv2_Chr7 | - | View |
Davidia involucrata | Dinv13688 | GWHABJS00000006 | + | View | |
Durio zibethinus | Duzib235G1393 | NW_019167982.1 | - | View | |
Erigeron canadensis | ECA232G3878 | Conyza_canadensis_scaffold:2 | + | View | |
Erythranthe guttata | Migut.D01162 | scaffold_4 | - | View | |
Erythranthe guttata | Migut.I00644 | scaffold_9 | - | View | |
Fragaria x ananassa | FAN14G5015 | 6.2.1.34 - Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase | Fvb6-1 | + | View |
Fragaria x ananassa | FAN02G0243 | 6.2.1.12//6.2.1.34 - 4-coumarate--CoA ligase / 4-coumaryl-CoA synthetase // Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase | Fvb6-4 | - | View |
Fragaria x ananassa | FAN05G4197 | 6.2.1.12//6.2.1.34 - 4-coumarate--CoA ligase / 4-coumaryl-CoA synthetase // Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase | Fvb6-3 | + | View |
Fragaria vesca | FvH4_6g27940 | 6.2.1.34 - Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase | Fvb6 | - | View |
Gossypium raimondii | Gorai.011G053700 | Chr11 | + | View | |
Helianthus annuus | HanXRQChr05g0157551 | Probable 4-coumarate--CoA ligase 2 | HanXRQChr05 | - | View |
Lotus japonicus | Lj3g0025595 | 6.2.1.34 - Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase | chr3 | - | View |
Lonicera japonica | Lj5A84G46 | GWHAAZE00000005 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_4_85240 | 6.2.1.34 - Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase | Lsat_1_v8_lg_4 | + | View |
Lactuca sativa | Lsat_1_v5_gn_5_9201 | 6.2.1.34 - Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase | Lsat_1_v8_lg_5 | - | View |
Malus domestica | MD17G1229400 | 4-coumarate:CoA ligase 2 | Chr17 | + | View |
Manihot esculenta | Manes.11G071800 | Chromosome11 | + | View | |
Petunia axillaris | Peaxi162Scf00314g00086 | 4-coumarate:CoA ligase 2 | Peaxi162Scf00314 | + | View |
Petunia axillaris | Peaxi162Scf00207g00334 | 4-coumarate:CoA ligase 2 | Peaxi162Scf00207 | + | View |
Prunus persica | Prupe.3G107300 | 6.2.1.34 - Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase | Pp03 | + | View |
Papaver somniferum | PSO063G5376 | NC_039364.1 | - | View | |
Populus trichocarpa | Potri.003G188500 | 6.2.1.12//6.2.1.34 - 4-coumarate--CoA ligase / 4-coumaryl-CoA synthetase // Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase | Chr03 | + | View |
Populus trichocarpa | Potri.001G036900 | 6.2.1.12//6.2.1.34 - 4-coumarate--CoA ligase / 4-coumaryl-CoA synthetase // Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase | Chr01 | - | View |
Phaseolus vulgaris | Phvul.005G184500 | 6.2.1.34 - Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase | Chr05 | + | View |
Rhododendron simsii | Rhsim08G0200700 | chr08 | + | View | |
Striga asiatica | SGA_v2.0_scaffold5G02825 | scaffold5 | + | View | |
Salvia bowleyana | SalBow7G0186 | GWHASIU00000005 | - | View | |
Salvia bowleyana | SalBow1G2391 | GWHASIU00000001 | + | View | |
Salix brachista | Sabra03G0137800 | GWHAAZH00000003 | + | View | |
Salix brachista | Sabra01G0025600 | GWHAAZH00000001 | - | View | |
Solanum lycopersicum | Solyc12g042460.2 | 4-coumarate:CoA ligase (AHRD V3.3 *** Q42879_LITER) | SL4.0ch12 | + | View |
Solanum lycopersicum | Solyc06g068650.4 | 4-coumarate:CoA ligase (AHRD V3.3 *** Q42879_LITER) | SL4.0ch06 | - | View |
Solanum lycopersicum | Solyc03g117870.3 | 4-coumarate:CoA ligase (AHRD V3.3 *** Q42879_LITER) | SL4.0ch03 | - | View |
Solanum pennellii | Sopen03g036780 | 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Solanum tuberosum (Potato), encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate. | 4-coumarate:CoA ligase 2 (4CL2) | CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site , AMP-dependent synthetase/ligase | BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 1 | Spenn-ch03 | - | View |
Solanum pennellii | Sopen06g025930 | 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Nicotiana tabacum (Common tobacco), encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate. | 4-coumarate:CoA ligase 2 (4CL2) | CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site , AMP-dependent synthetase/ligase | BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 1 | Spenn-ch06 | - | View |
Solanum tuberosum | PGSC0003DMG400028929 | 4-coumarate--CoA ligase 2 | ST4.03ch06 | - | View |
Solanum tuberosum | PGSC0003DMG400014223 | 4-coumarate--CoA ligase 2 | ST4.03ch03 | - | View |
Trochodendron aralioides | TAR636G1179 | group1 | + | View | |
Vaccinium macrocarpon | vmacro19091 | Similar to 4CL1: 4-coumarate--CoA ligase 1 (Nicotiana tabacum OX%3D4097) | chr5_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo1080G1411 | CM024079.1 | - | View |