Gene: Sopen03g036780
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g036780
- Transcript Identifier Sopen03g036780.1
- Gene Type Coding gene
- Location Spenn-ch03 : 71387382-71390558 : negative
Gene Family Information
- ID HOM05D000169
- #Genes/#Species 2209/100
- Phylogenetic origin
- ID ORTHO05D001214
- #Genes/#Species 456/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g036780.1
Descriptions
- Description 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Solanum tuberosum (Potato), encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate. | 4-coumarate:CoA ligase 2 (4CL2) | CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site , AMP-dependent synthetase/ligase | BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010044 | ISO | PLAZA Integrative Orthology | response to aluminum ion | Os06g0656500 |
| GO:0009809 | ISO | PLAZA Integrative Orthology | lignin biosynthetic process | Os06g0656500 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT3G21240 |
| GO:0009698 | ISO | PLAZA Integrative Orthology | phenylpropanoid metabolic process | AT3G21240 |
| GO:0009411 | ISO | PLAZA Integrative Orthology | response to UV | AT3G21240 |
| GO:0009620 | ISO | PLAZA Integrative Orthology | response to fungus | AT3G21240 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016207 | ISO | PLAZA Integrative Orthology | 4-coumarate-CoA ligase activity | AT3G21240 |
| GO:0106290 | ISO | PLAZA Integrative Orthology | trans-cinnamate-CoA ligase activity | Os02g0177600 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |