Gene: Sopen06g025930
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen06g025930
- Transcript Identifier Sopen06g025930.1
- Gene Type Coding gene
- Location Spenn-ch06 : 53090890-53094570 : negative
Gene Family Information
- ID HOM05D000169
- #Genes/#Species 2209/100
- Phylogenetic origin
- ID ORTHO05D001214
- #Genes/#Species 456/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen06g025930.1
Descriptions
- Description 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Nicotiana tabacum (Common tobacco), encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate. | 4-coumarate:CoA ligase 2 (4CL2) | CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site , AMP-dependent synthetase/ligase | BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009699 | ISO | PLAZA Integrative Orthology | phenylpropanoid biosynthetic process | AT3G21230 |
| GO:0009698 | ISO | PLAZA Integrative Orthology | phenylpropanoid metabolic process | Os08g0245200 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016207 | ISO | PLAZA Integrative Orthology | 4-coumarate-CoA ligase activity | AT3G21230 |
| GO:0106290 | ISO | PLAZA Integrative Orthology | trans-cinnamate-CoA ligase activity | Os08g0245200 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |