Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G16120 LG-1 + View
Acer truncatum Atru.chr3.1018 chr3 + View
Actinidia chinensis Actinidia11979 Lachesis_group11 - View
Arabidopsis lyrata AL8G43730 scaffold_8 - View
Arabidopsis thaliana AT5G67570 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentratricopeptide repeat containing protein that is targeted to the chloroplast. Mutants have pale young leave and reduced accumulation of plastid encoded transcripts suggesting a role for DG1 in regulation of plastid gene expression. DELAYED GREENING 1 (DG1)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: chloroplast organization%2C embryo development ending in seed dormancy%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G30610.2)%3B Has 18472 Blast hits to 7295 proteins in 194 species: Archae - 0%3B Bacteria - 17%3B Metazoa - 30%3B Fungi - 92%3B Plants - 17734%3B Viruses - 0%3B Other Eukaryotes - 599 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB02g09912 ChrB02 - View
Brassica napus C03p59620 C03 + View
Brassica napus A06p32850 A06 - View
Brassica rapa BraA06t26217Z A06 - View
Beta vulgaris EL10Ac6g15614 PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Chr6_EL10_PGA_scaffold0 - View
Capsicum annuum CAN.G1075.41 PGAv.1.6.scaffold1075 + View
Cicer arietinum L. Ca_22104_v3 Ca_LG7_v3 - View
Corylus avellana Haze_15279 Similar to DG1: Pentatricopeptide repeat-containing protein At5g67570, chloroplastic (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc07_g07130 Uncharacterized protein chr7 + View
Citrus clementina Ciclev10027042m.g scaffold_7 + View
Carpinus fangiana Cfa004135 Cfa01 + View
Cardamine hirsuta CARHR280020 Pentatricopeptide repeat-containing protein Chr8 - View
Carya illinoinensis CiPaw.02G002000 PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Chr02 - View
Citrullus lanatus ClCG01G017610 Pentatricopeptide repeat-containing protein CG_Chr01 + View
Cucumis melo MELO3C007638.2 Pentatricopeptide repeat-containing protein chr08 + View
Corchorus olitorius COL.COLO4_11581 hypothetical protein AWUE01014716.1 + View
Carica papaya Cpa.g.sc6.12 supercontig_6 - View
Chenopodium quinoa AUR62004013 DG1: Pentatricopeptide repeat-containing protein At5g67570, chloroplastic C_Quinoa_Scaffold_2370 + View
Chenopodium quinoa AUR62040234 DG1: Pentatricopeptide repeat-containing protein At5g67570, chloroplastic C_Quinoa_Scaffold_4447 - View
Capsella rubella Carub.0008s2690 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_8 - View
Cucumis sativus L. CsaV3_6G044150 pentatricopeptide repeat-containing protein At5g67570, chloroplastic chr6 + View
Davidia involucrata Dinv04045 GWHABJS00000021 + View
Durio zibethinus Duzib147G0765 NW_019168470.1 - View
Erigeron canadensis ECA232G4547 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.H02309 Chr08 + View
Erythranthe guttata Migut.H00344 scaffold_8 - View
Eutrema salsugineum Thhalv10003664m.g PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) scaffold_6 + View
Fragaria x ananassa FAN23G1279 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb1-3 + View
Fragaria x ananassa FAN28G1616 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb1-1 - View
Fragaria x ananassa FAN26G2782 PF01535 - PPR repeat (PPR) Fvb1-2 + View
Fragaria x ananassa FAN19G3227 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb1-4 + View
Fragaria vesca FvH4_1g17780 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb1 + View
Gossypium hirsutum Gohir.D11G208900 PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) D11 + View
Gossypium hirsutum Gohir.A11G214500 PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) A11 - View
Glycine max Glyma.05G105867 PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Gm05 + View
Glycine max Glyma.17G160600 PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Gm17 - View
Gossypium raimondii Gorai.007G224000 Chr07 + View
Helianthus annuus HanXRQChr12g0373011 Probable tetratricopeptide repeat (TPR)-like superfamily protein HanXRQChr12 - View
Hydrangea macrophylla Hma1.2p1_0852F.1_g228550 Hma1.2p1_0852F.1 + View
Lotus japonicus Lj4g0009360 PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) chr4 + View
Lonicera japonica Lj7A99T39 GWHAAZE00000007 + View
Lactuca sativa Lsat_1_v5_gn_4_161581 Lsat_1_v8_lg_4 - View
Malus domestica MD02G1186800 Tetratricopeptide repeat (TPR)-like superfamily protein Chr02 + View
Manihot esculenta Manes.13G111300 Chromosome13 - View
Medicago truncatula Medtr4g097120 PPR containing plant-like protein chr4 + View
Nelumbo nucifera Nn5g30601 chr5 + View
Nicotiana tabacum Nitab4.5_0000142g0100 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0000142 + View
Petunia axillaris Peaxi162Scf00548g00537 Pentatricopeptide repeat-containing protein Peaxi162Scf00548 - View
Punica granatum PGR102G1548 NC_045129.1 - View
Prunus persica Prupe.6G219900 Pp06 - View
Pisum sativum Psat4g081600 PPR repeat family chr4LG4 - View
Papaver somniferum PSO017G1191 NC_039362.1 + View
Papaver somniferum PSO170G3422 NC_039360.1 + View
Populus trichocarpa Potri.007G004900 PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Chr07 + View
Phaseolus vulgaris Phvul.003G234700 Chr03 - View
Quercus lobata QL06p039535 6 - View
Rosa chinensis RcHm_v2.0_Chr2g0108141 RcHm_v2.0_Chr2 + View
Striga asiatica SGA_v2.0_scaffold15G07462 scaffold15 + View
Salvia bowleyana SalBow3G1040 GWHASIU00000006 + View
Salix brachista Sabra07G0003500 GWHAAZH00000007 + View
Simmondsia chinensis Sc03g0002410 GWHAASQ00000003 + View
Sechium edule Sed0017824 LG14 + View
Solanum lycopersicum Solyc02g092310.4 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G2XHA6_CAPBA) SL4.0ch02 - View
Schrenkiella parvula Sp2g29080 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch2-4 - View
Solanum pennellii Sopen02g036880 Encodes a pentratricopeptide repeat containing protein that is targeted to the chloroplast. Mutants have pale young leave and reduced accumulation of plastid encoded transcripts suggesting a role for DG1 in regulation of plastid gene expression. | DELAYED GREENING 1 (DG1) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: chloroplast organization, embryo development ending in seed dormancy | LOCATED IN: chloroplast | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400021442 GTP binding protein ST4.03ch02 - View
Selenicereus undatus Hund16403 Scaffold_33677 + View
Trochodendron aralioides TAR628G1592 group5 - View
Theobroma cacao Thecc.01G073100 Tetratricopeptide repeat-like superfamily protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104821203 pentatricopeptide repeat-containing protein At5g67570%2C chloroplastic NW_010966459.1 + View
Trifolium pratense TPR.G24212 Tp57577_TGAC_v2_LG5 + View
Vaccinium macrocarpon vmacro05412 Similar to DG1: Pentatricopeptide repeat-containing protein At5g67570, chloroplastic (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G0681 CM024069.1 - View