Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0015216 PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD3 [Vitis vinifera] Chr10 + View
CSS0043430 PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD3 [Vitis vinifera] Chr6 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G1540 LG-11 - View
Acer truncatum Atru.chr6.1907 chr6 - View
Actinidia chinensis Actinidia30591 Lachesis_group10 + View
Actinidia chinensis Actinidia18309 Lachesis_group13 - View
Actinidia chinensis Actinidia22121 Lachesis_group15 - View
Arabidopsis lyrata AL8G38740 scaffold_8 + View
Arabidopsis lyrata AL6G23920 scaffold_6 - View
Avicennia marina MSTRG.11227 ScioBoG_14204_HRSCAF_14270 + View
Avicennia marina MSTRG.8049 ScioBoG_102841_HRSCAF_103114 - View
Avicennia marina MSTRG.459 ScioBoG_102831_HRSCAF_103044 + View
Amaranthus hybridus Ah.11g046820 ADP-ribosylation factor GTPase-activating protein AGD1 (ARF GAP AGD1) (Protein ARF-GAP DOMAIN 1) (AtAGD1) AmaHy_arrow1_Scaffold_11 - View
Amaranthus hybridus Ah.03g135580 AmaHy_arrow1_Scaffold_3 + View
Aquilegia oxysepala Aqoxy5G03158 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DE24KT PF00169//PF01412//PF03114//PF12796//PF16746 - PH domain (PH) // Putative GTPase activating protein for Arf (ArfGap) // BAR domain (BAR) // Ankyrin repeats (3 copies) (Ank_2) // BAR domain of APPL family (BAR_3) arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WVN0A7 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SL3LA8 PF00169//PF01412//PF03114//PF13637 - PH domain (PH) // Putative GTPase activating protein for Arf (ArfGap) // BAR domain (BAR) // Ankyrin repeats (many copies) (Ank_4) arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D9KF4I K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) arahy.Tifrunner.gnm1.Arahy.18 - View
Arabidopsis thaliana AT5G61980 ARF-GAP domain 1 A member of ARF GAP domain (AGD)%2C A thaliana has 15 members%2C grouped into four classes. AGD1 belongs to the class 1%2C together with AGD2%2C AGD3 and AGD4. Not expressed in hypocotyls and cotyledons. ARF-GAP domain 1 (AGD1)%3B FUNCTIONS IN: ARF GTPase activator activity%2C zinc ion binding%3B INVOLVED IN: cytoskeleton organization%3B LOCATED IN: endocytic vesicle%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164)%2C Pleckstrin homology-type (InterPro:IPR011993)%2C Ankyrin repeat-containing domain (InterPro:IPR020683)%2C BAR (InterPro:IPR004148)%2C Pleckstrin homology (InterPro:IPR001849)%2C Ankyrin repeat (InterPro:IPR002110)%3B BEST Arabidopsis thaliana protein match is: ARF GTPase-activating protein (TAIR:AT5G13300.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT5G13300 ARF GTPase-activating protein Belongs to 15-member small GTPase gene family%2C ARF-GAP domain proteins (AGD)%3B corresponds to AGD3%2C and is one of four proteins belonging to class 1%2C together with AGD1%2C AGD2 and AGD4. The protein contains four domains: BAR domain%2C PH domain%2C an ARF-GAP domain%2C and two Ankyrin repeats. In sfc mutants%2C the secondary and tertiary veins of cotyledons%2C leaves%2C sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin. SCARFACE (SFC)%3B FUNCTIONS IN: ARF GTPase activator activity%2C phosphoinositide binding%3B INVOLVED IN: xylem and phloem pattern formation%2C response to auxin stimulus%2C phloem or xylem histogenesis%2C leaf morphogenesis%3B LOCATED IN: cytosol%2C trans-Golgi network transport vesicle%2C plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164)%2C Pleckstrin homology-type (InterPro:IPR011993)%2C Ankyrin repeat-containing domain (InterPro:IPR020683)%2C BAR (InterPro:IPR004148)%2C Pleckstrin homology (InterPro:IPR001849)%2C Ankyrin repeat (InterPro:IPR002110)%3B BEST Arabidopsis thaliana protein match is: ARF-GAP domain 1 (TAIR:AT5G61980.1)%3B Has 64753 Blast hits to 27558 proteins in 1221 species: Archae - 110%3B Bacteria - 5131%3B Metazoa - 34265%3B Fungi - 4887%3B Plants - 2591%3B Viruses - 654%3B Other Eukaryotes - 17115 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB07g29806 ChrB07 - View
Brassica carinata BcaC01g02452 ChrC01 + View
Brassica napus C02p61800 C02 + View
Brassica napus A06p28680 A06 + View
Brassica napus C03p65120 C03 - View
Brassica oleracea BolC3t18766H C3 - View
Brassica oleracea BolC2t12236H C2 + View
Brassica rapa BraA02t09123Z A02 + View
Brassica rapa BraA06t25808Z A06 + View
Beta vulgaris EL10Ac5g11298 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Chr5_EL10_PGA_scaffold2 + View
Beta vulgaris EL10Ac6g13605 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Chr6_EL10_PGA_scaffold0 - View
Capsicum annuum CAN.G843.16 PGAv.1.6.scaffold843 + View
Cannabis sativa CANSAT56G1813 NC_044371.1 - View
Corylus avellana Haze_12495 Similar to AGD3: ADP-ribosylation factor GTPase-activating protein AGD3 (Arabidopsis thaliana OX%3D3702) 9 - View
Corylus avellana Haze_07106 Similar to AGD3: ADP-ribosylation factor GTPase-activating protein AGD3 (Arabidopsis thaliana OX%3D3702) 4 + View
Citrus clementina Ciclev10030874m.g scaffold_4 - View
Ceratophyllum demersum CDE02G0857 1 - View
Ceratophyllum demersum CDE06G2303 4 - View
Carpinus fangiana Cfa018714 Cfa08 + View
Carpinus fangiana Cfa009443 Cfa03 - View
Cardamine hirsuta CARHR275780 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 Chr8 + View
Carya illinoinensis CiPaw.05G102000 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Chr05 + View
Carya illinoinensis CiPaw.06G108900 PTHR23180:SF284 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD3 Chr06 - View
Corchorus olitorius COL.COLO4_37244 Arf GTPase activating protein AWUE01023868.1 - View
Carica papaya Cpa.g.sc13.160 supercontig_13 - View
Chenopodium quinoa AUR62041692 AGD1: ADP-ribosylation factor GTPase-activating protein AGD1 C_Quinoa_Scaffold_1102 - View
Chenopodium quinoa AUR62009527 AGD1: ADP-ribosylation factor GTPase-activating protein AGD1 C_Quinoa_Scaffold_2493 - View
Chenopodium quinoa AUR62028845 AGD3: ADP-ribosylation factor GTPase-activating protein AGD3 C_Quinoa_Scaffold_2837 + View
Chenopodium quinoa AUR62005710 AGD3: ADP-ribosylation factor GTPase-activating protein AGD3 C_Quinoa_Scaffold_1214 - View
Capsella rubella Carub.0008s2267 PTHR23180//PTHR23180:SF284 - CENTAURIN/ARF // ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD3 scaffold_8 + View
Capsella rubella Carub.0006s1147 PTHR23180//PTHR23180:SF284 - CENTAURIN/ARF // ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD3 scaffold_6 - View
Daucus carota DCAR_021405 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv13730 GWHABJS00000006 - View
Davidia involucrata Dinv23215 GWHABJS00000019 - View
Durio zibethinus Duzib248G0895 NW_019168048.1 - View
Erigeron canadensis ECA232G3875 Conyza_canadensis_scaffold:2 - View
Erythranthe guttata Migut.K01064 scaffold_11 + View
Eutrema salsugineum Thhalv10012699m.g PTHR23180:SF284 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD3 scaffold_2 - View
Eutrema salsugineum Thhalv10003653m.g PTHR23180:SF284 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD3 scaffold_6 - View
Fragaria x ananassa FAN18G0210 PF00169//PF01412//PF03114//PF13637 - PH domain (PH) // Putative GTPase activating protein for Arf (ArfGap) // BAR domain (BAR) // Ankyrin repeats (many copies) (Ank_4) Fvb5-1 - View
Fragaria x ananassa FAN12G1930 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Fvb4-3 - View
Fragaria x ananassa FAN13G0724 PF00169//PF01412//PF13637//PF16746 - PH domain (PH) // Putative GTPase activating protein for Arf (ArfGap) // Ankyrin repeats (many copies) (Ank_4) // BAR domain of APPL family (BAR_3) Fvb5-2 - View
Fragaria x ananassa FAN17G1894 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Fvb4-2 - View
Fragaria x ananassa FAN07G1053 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Fvb4-4 - View
Fragaria vesca FvH4_5g09370 KOG0521 - Putative GTPase activating proteins (GAPs) Fvb5 - View
Fragaria vesca FvH4_4g22770 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Fvb4 + View
Gossypium hirsutum Gohir.A03G056400 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) A03 + View
Gossypium hirsutum Gohir.D03G110100 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) D03 - View
Glycine max Glyma.06G164667 PTHR23180//PTHR23180:SF284 - CENTAURIN/ARF // ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD3 Gm06 + View
Glycine max Glyma.05G200700 PF00169//PF01412//PF03114//PF13637 - PH domain (PH) // Putative GTPase activating protein for Arf (ArfGap) // BAR domain (BAR) // Ankyrin repeats (many copies) (Ank_4) Gm05 + View
Glycine max Glyma.04G200800 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Gm04 - View
Gossypium raimondii Gorai.003G116500 Chr03 - View
Helianthus annuus HanXRQChr09g0273901 Putative arf GTPase activating protein; BAR domain; PH domain-like; Ankyrin repeat-containing domain; Arfaptin homology (AH) domain/BAR domain HanXRQChr09 + View
Lupinus albus Lalb_Chr12g0202471 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Lalb_Chr12 - View
Lupinus albus Lalb_Chr08g0237511 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Lalb_Chr08 - View
Lotus japonicus Lj4g0013823 PF00169//PF01412//PF03114//PF13637 - PH domain (PH) // Putative GTPase activating protein for Arf (ArfGap) // BAR domain (BAR) // Ankyrin repeats (many copies) (Ank_4) chr4 - View
Lotus japonicus Lj1g0016671 KOG0521 - Putative GTPase activating proteins (GAPs) chr1 - View
Lonicera japonica Lj9C486G12 GWHAAZE00000009 - View
Lonicera japonica Lj5A87T64 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_4_84620 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Lsat_1_v8_lg_4 - View
Magnolia biondii MBI07_g07337_MAGBIO AED:0.14 Chr07 + View
Malus domestica MD14G1148100 ARF-GAP domain 1 Chr14 + View
Malus domestica MD13G1129800 ARF GTPase-activating protein Chr13 - View
Malus domestica MD06G1131800 ARF-GAP domain 1 Chr06 + View
Malus domestica MD16G1130100 ARF GTPase-activating protein Chr16 - View
Manihot esculenta Manes.09G187500 Chromosome09 - View
Manihot esculenta Manes.06G126100 Chromosome06 - View
Manihot esculenta Manes.08G101900 Chromosome08 + View
Medicago truncatula Medtr8g100100 ADP-ribosylation factor GTPase-activating protein AGD10 chr8 + View
Medicago truncatula Medtr3g098680 ADP-ribosylation factor GTPase-activating protein AGD10 chr3 + View
Nelumbo nucifera Nn4g22146 chr4 + View
Nelumbo nucifera Nn3g16287 chr3 + View
Nicotiana tabacum Nitab4.5_0000663g0210 Arf GTPase activating protein, Ankyrin repeat-containing domain, BAR domain, Ankyrin repeat, Pleckstrin homology-like domain, Pleckstrin homology domain, Arfaptin homology (AH) domain/BAR domain Nitab4.5_0000663 - View
Petunia axillaris Peaxi162Scf00314g00540 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 Peaxi162Scf00314 - View
Prunus persica Prupe.5G142800 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Pp05 + View
Prunus persica Prupe.1G216500 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Pp01 + View
Pisum sativum Psat7g039200 BAR domain of APPL family chr7LG7 - View
Papaver somniferum PSO478G2522 NC_039361.1 + View
Populus trichocarpa Potri.003G163200 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Chr03 + View
Populus trichocarpa Potri.001G066800 PF00169//PF01412//PF03114//PF13637 - PH domain (PH) // Putative GTPase activating protein for Arf (ArfGap) // BAR domain (BAR) // Ankyrin repeats (many copies) (Ank_4) Chr01 - View
Populus trichocarpa Potri.015G105500 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Chr15 - View
Phaseolus vulgaris Phvul.002G282100 PF00169//PF01412//PF03114//PF13637 - PH domain (PH) // Putative GTPase activating protein for Arf (ArfGap) // BAR domain (BAR) // Ankyrin repeats (many copies) (Ank_4) Chr02 + View
Phaseolus vulgaris Phvul.009G161700 K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein (ACAP) Chr09 + View
Quercus lobata QL10p000700 10 + View
Quercus lobata QL03p049594 3 + View
Rosa chinensis RcHm_v2.0_Chr7g0188801 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim08G0196400 chr08 - View
Rhododendron simsii Rhsim12G0017800 chr12 + View
Striga asiatica SGA_v2.0_scaffold40G15624 scaffold40 - View
Salvia bowleyana SalBow2G3327 GWHASIU00000007 - View
Salix brachista Sabra01G0046400 GWHAAZH00000001 - View
Salix brachista Sabra03G0118700 GWHAAZH00000003 + View
Salix brachista Sabra15G0125800 GWHAAZH00000015 - View
Simmondsia chinensis Sc04g0000220 GWHAASQ00000004 + View
Solanum lycopersicum Solyc03g118260.3 Adp-ribosylation factor gtpase-activating protein agd3 (AHRD V3.3 *** A0A1J6J465_NICAT) SL4.0ch03 + View
Schrenkiella parvula Sp2g25160 PTHR23180//PTHR23180:SF284 - CENTAURIN/ARF // ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD3 ch2-4 + View
Solanum pennellii Sopen03g037170 Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD) | corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin. | SCARFACE (SFC) | FUNCTIONS IN: ARF GTPase activator activity, phosphoinositide binding | INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, phloem or xylem histogenesis, leaf morphogenesis | LOCATED IN: cytosol, trans-Golgi network transport vesicle, plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein , Pleckstrin homology-type , Ankyrin repeat-containing domain , BAR , Pleckstrin homology , Ankyrin repeat | BEST Arabidopsis thaliana protein match is: ARF-GAP domain 1 Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400014177 ADP-ribosylation factor GTPase-activating protein AGD1 ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400002249 ATP binding protein ST4.03ch05 - View
Selenicereus undatus Hund02503 Scaffold_33678 - View
Selenicereus undatus Hund10046 Scaffold_10417 + View
Selenicereus undatus Hund25506 Scaffold_3410 - View
Trochodendron aralioides TAR629G2226 group0 + View
Trochodendron aralioides TAR622G0719 group8 + View
Theobroma cacao Thecc.03G139300 ARF-GAP domain 1 Chromosome_3 - View
Theobroma cacao Thecc.02G193400 ARF GTPase-activating protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104801806 ADP-ribosylation factor GTPase-activating protein AGD1-like NW_010960188.1 + View
Tarenaya hassleriana THA.LOC104807322 ADP-ribosylation factor GTPase-activating protein AGD3 isoform X1 NW_010960187.1 + View
Trifolium pratense TPR.G21588 Tp57577_TGAC_v2_LG3 + View
Trifolium pratense TPR.G12802 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI23G0713 NC_052239.1 + View
Vaccinium macrocarpon vmacro01024 Similar to AGD3: ADP-ribosylation factor GTPase-activating protein AGD3 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro19176 Similar to AGD3: ADP-ribosylation factor GTPase-activating protein AGD3 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G2767 CM024069.1 + View
Vigna mungo VMungo1309G3088 CM024072.1 - View
Vitis vinifera GSVIVG01001079001 chr1 - View
Vitis vinifera GSVIVG01008640001 chr17 + View
Zea mays Zm00001eb037010 Zm00001e003703 Discolored-paralog2 1 - View