Gene: MSTRG.459
General Information
Structural Information
- Species Avicennia marina
- Gene Identifier MSTRG.459
- Transcript Identifier MSTRG.459.1
- Gene Type Coding gene
- Location ScioBoG_102831_HRSCAF_103044 : 8799396-8808346 : positive
Gene Family Information
- ID HOM05D001362
- #Genes/#Species 459/100
- Phylogenetic origin
- ID ORTHO05D001310
- #Genes/#Species 434/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- tid MSTRG.459.1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010087 | ISO | PLAZA Integrative Orthology | phloem or xylem histogenesis | AT5G13300 |
| GO:0010051 | ISO | PLAZA Integrative Orthology | xylem and phloem pattern formation | AT5G13300 |
| GO:0006897 | ISO | PLAZA Integrative Orthology | endocytosis | AT5G13300 |
| GO:0009965 | ISO | PLAZA Integrative Orthology | leaf morphogenesis | AT5G13300 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT5G13300 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005096 | IEA | InterPro | GTPase activator activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0035091 | ISO | PLAZA Integrative Orthology | phosphatidylinositol binding | AT5G13300 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0030140 | ISO | PLAZA Integrative Orthology | trans-Golgi network transport vesicle | AT5G13300 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G13300 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G13300 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036770 | Ankyrin repeat-containing domain superfamily |
| IPR001164 | Arf GTPase activating protein |
| IPR027267 | AH/BAR domain superfamily |
| IPR004148 | BAR domain |
| IPR038508 | ArfGAP domain superfamily |
| IPR002110 | Ankyrin repeat |
| IPR020683 | Ankyrin repeat-containing domain |
| IPR001849 | Pleckstrin homology domain |
| IPR011993 | PH-like domain superfamily |
| IPR035670 | Plant AGD1/2/3/4, BAR domain |
| IPR037278 | ARFGAP/RecO-like zinc finger |
| Mapman id | Description |
|---|---|
| 22.3.2.3.1 | Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase activation.class I ARF-GAP protein |