Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G1520 LG-4 - View
Acer truncatum Atru.chr1.67 chr1 + View
Arabidopsis lyrata AL2G40110 scaffold_2 + View
Arabidopsis lyrata AL1G28460 scaffold_1 - View
Avicennia marina MSTRG.13089 ScioBoG_17730_HRSCAF_17811 - View
Avicennia marina MSTRG.16093 ScioBoG_19538_HRSCAF_19626 + View
Arabidopsis thaliana AT1G79500 Aldolase-type TIM barrel family protein Encodes a protein with 3-deoxy-8-phosphooctulonate synthase (KDOP synthase) activity which is involved in the biosynthesis of KDO%2C a component of cell wall rhamnogalacturonan II. AtkdsA1%3B FUNCTIONS IN: 3-deoxy-8-phosphooctulonate synthase activity%3B INVOLVED IN: metabolic process%2C rhamnogalacturonan II biosynthetic process%3B LOCATED IN: endomembrane system%2C cytoplasm%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DAHP synthetase I/KDSA (InterPro:IPR006218)%2C Aldolase-type TIM barrel (InterPro:IPR013785)%2C 3-deoxy-8-phosphooctulonate synthase (InterPro:IPR006269)%3B BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G16340.3)%3B Has 7925 Blast hits to 7923 proteins in 2056 species: Archae - 64%3B Bacteria - 5004%3B Metazoa - 4%3B Fungi - 0%3B Plants - 58%3B Viruses - 0%3B Other Eukaryotes - 2795 (source: NCBI BLink). AtkdsA1%3B FUNCTIONS IN: 3-deoxy-8-phosphooctulonate synthase activity%3B INVOLVED IN: metabolic process%2C rhamnogalacturonan II biosynthetic process%3B LOCATED IN: endomembrane system%2C cytoplasm%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DAHP synthetase I/KDSA (InterPro:IPR006218)%2C Aldolase-type TIM barrel (InterPro:IPR013785)%2C 3-deoxy-8-phosphooctulonate synthase (InterPro:IPR006269)%3B BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G16340.3)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G16340 Aldolase superfamily protein Encodes a protein with putative 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase activity. This gene share a very high sequence homology with its homologue AtkdsA1 (AT1G79500). ATKDSA2%3B FUNCTIONS IN: 3-deoxy-8-phosphooctulonate synthase activity%3B INVOLVED IN: metabolic process%2C rhamnogalacturonan II biosynthetic process%3B LOCATED IN: endomembrane system%2C cytoplasm%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: DAHP synthetase I/KDSA (InterPro:IPR006218)%2C Aldolase-type TIM barrel (InterPro:IPR013785)%2C 3-deoxy-8-phosphooctulonate synthase (InterPro:IPR006269)%3B BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G79500.4)%3B Has 7899 Blast hits to 7897 proteins in 2055 species: Archae - 64%3B Bacteria - 4967%3B Metazoa - 4%3B Fungi - 0%3B Plants - 58%3B Viruses - 0%3B Other Eukaryotes - 2806 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC08g45351 ChrC08 - View
Brassica carinata BcaB02g07218 ChrB02 + View
Brassica napus C06p29850 C06 - View
Brassica napus A07p27110 A07 - View
Brassica napus A02p22860 A02 + View
Brassica oleracea BolC6t38147H C6 - View
Brassica rapa BraA07t30356Z A07 - View
Citrus clementina Ciclev10005458m.g scaffold_9 + View
Cardamine hirsuta CARHR016810 2-dehydro-3-deoxyphosphooctonate aldolase Chr1 - View
Cardamine hirsuta CARHR073160 2-dehydro-3-deoxyphosphooctonate aldolase Chr2 + View
Carica papaya Cpa.g.sc32.74 supercontig_32 - View
Capsella rubella Carub.0001s1608 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase scaffold_1 - View
Capsella rubella Carub.0002s2636 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase scaffold_2 + View
Daucus carota DCAR_016846 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_013716 hypothetical protein DCARv2_Chr4 - View
Durio zibethinus Duzib187G1348 NW_019167860.1 - View
Durio zibethinus Duzib268G0296 NW_019168270.1 + View
Erythranthe guttata Migut.H01658 scaffold_8 + View
Eutrema salsugineum Thhalv10008359m.g 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase scaffold_5 + View
Eutrema salsugineum Thhalv10018956m.g 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase scaffold_9 - View
Fragaria x ananassa FAN11G3302 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase Fvb3-4 - View
Fragaria x ananassa FAN16G1654 K01627 - 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) (kdsA) Fvb3-3 + View
Fragaria x ananassa FAN21G0266 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase Fvb3-2 + View
Fragaria x ananassa FAN25G1815 K01627 - 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) (kdsA) Fvb3-1 - View
Fragaria vesca FvH4_3g14500 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase Fvb3 + View
Hydrangea macrophylla Hma1.2p1_0151F.1_g067120 Hma1.2p1_0151F.1 + View
Malus domestica MD10G1213400 Aldolase superfamily protein Chr10 - View
Malus domestica MD05G1236400 Aldolase superfamily protein Chr05 - View
Prunus persica Prupe.4G129800 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase Pp04 + View
Quercus lobata QL04p092971 4 - View
Rosa chinensis RcHm_v2.0_Chr5g0023881 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim06G0243500 chr06 - View
Striga asiatica SGA_v2.0_scaffold49G18204 scaffold49 - View
Striga asiatica SGA_v2.0_scaffold239G44014 scaffold239 + View
Salvia bowleyana SalBow8G3927 GWHASIU00000004 + View
Salvia bowleyana SalBow8G2534 GWHASIU00000004 + View
Schrenkiella parvula Sp5g34553 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase ch5-7 + View
Tarenaya hassleriana THA.LOC104812380 2-dehydro-3-deoxyphosphooctonate aldolase 1-like NW_010965372.1 - View
Vaccinium macrocarpon vmacro11688 Similar to KDSA1: 2-dehydro-3-deoxyphosphooctonate aldolase 1 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01036737001 chr19 - View