Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0041529 PREDICTED: NEP1-interacting protein-like 1 [Vitis vinifera] Chr1 + View
CSS0005429 PREDICTED: NEP1-interacting protein-like 1 [Vitis vinifera] Chr2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G14550 LG-1 + View
Aethionema arabicum Aa31LG6G12790 LG-6 + View
Aethionema arabicum Aa31LG8G15010 LG-8 + View
Acer truncatum Atru.chr3.904 chr3 - View
Actinidia chinensis Actinidia17408 Lachesis_group11 - View
Actinidia chinensis Actinidia28731 Lachesis_group8 + View
Arabidopsis lyrata AL7G15230 scaffold_7 - View
Avicennia marina MSTRG.15585 ScioBoG_19538_HRSCAF_19626 - View
Amaranthus hybridus Ah.03g134310 NEP1-interacting protein 1 (RING-H2 finger protein ATL26) AmaHy_arrow1_Scaffold_3 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.S5VJ64 PTHR14155//PTHR14155:SF120 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1ZFB6C PTHR14155//PTHR14155:SF120 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6C8X0F PF13639 - Ring finger domain (zf-RING_2) arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT2G17730 NEP-interacting protein 2 Intrinsic thylakoid membrane protein that fixes RPOTmp on the stromal side of the thylakoid membrane. NEP-interacting protein 2 (NIP2)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G35840.1)%3B Has 9242 Blast hits to 9216 proteins in 266 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 2260%3B Fungi - 688%3B Plants - 5081%3B Viruses - 18%3B Other Eukaryotes - 1193 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT4G35840 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: NEP-interacting protein 2 (TAIR:AT2G17730.1)%3B Has 8964 Blast hits to 8940 proteins in 268 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 2132%3B Fungi - 649%3B Plants - 5031%3B Viruses - 28%3B Other Eukaryotes - 1122 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC04g23111 ChrC04 + View
Brassica carinata BcaB03g16546 ChrB03 + View
Brassica napus C01p03200 C01 - View
Brassica napus C03p58700 C03 + View
Brassica napus A01p02880 A01 - View
Brassica napus C07p05550 C07 - View
Brassica oleracea BolC1t00305H C1 - View
Brassica oleracea BolC7t40954H C7 - View
Brassica rapa BraA01t00269Z A01 - View
Brassica rapa BraA06t26299Z A06 - View
Beta vulgaris EL10Ac6g13331 PF13441 - YMGG-like Gly-zipper (Gly-zipper_YMGG) Chr6_EL10_PGA_scaffold0 - View
Capsicum annuum CAN.G354.65 PGAv.1.6.scaffold354 - View
Capsicum annuum CAN.G890.32 PGAv.1.6.scaffold890 + View
Cannabis sativa CANSAT01G2753 NC_044373.1 + View
Cicer arietinum L. Ca_24939_v3 Ca_LG8_v3 - View
Corylus avellana Haze_03706 Similar to NIP2: NEP1-interacting protein 2 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc07_g11290 NEP1-interacting protein 1 chr7 - View
Citrus clementina Ciclev10026387m.g scaffold_7 + View
Carpinus fangiana Cfa007027 Cfa02 - View
Cardamine hirsuta CARHR244210 RING finger family protein Chr7 + View
Cardamine hirsuta CARHR108050 RING finger family protein Chr3 + View
Carya illinoinensis CiPaw.07G063100 PF13488 - Glycine zipper (Gly-zipper_Omp) Chr07 - View
Carya illinoinensis CiPaw.08G126500 PF13488//PF13639 - Glycine zipper (Gly-zipper_Omp) // Ring finger domain (zf-RING_2) Chr08 - View
Citrullus lanatus ClCG10G000480 RING finger family protein CG_Chr10 + View
Cucumis melo MELO3C013744.2 RING-H2 finger protein ATL4M, putative chr06 + View
Corchorus olitorius COL.COLO4_22492 Zinc finger%2C RING-type AWUE01017978.1 - View
Carica papaya Cpa.g.sc6.310 supercontig_6 - View
Chenopodium quinoa AUR62026410 NIP1: NEP1-interacting protein 1 C_Quinoa_Scaffold_4244 + View
Chenopodium quinoa AUR62026228 NIP1: NEP1-interacting protein 1 C_Quinoa_Scaffold_3298 + View
Capsella rubella Carub.0007s0439 PTHR14155//PTHR14155:SF180 - RING FINGER DOMAIN-CONTAINING // RING/U-BOX DOMAIN-CONTAINING PROTEIN-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_3G000540 RING/U-box superfamily protein chr3 + View
Daucus carota DCAR_011579 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv08550 GWHABJS00000012 - View
Durio zibethinus Duzib187G1536 NW_019167860.1 - View
Durio zibethinus Duzib264G1174 NW_019167960.1 - View
Erigeron canadensis ECA246G1521 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA232G3628 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.J02487 Chr10 - View
Eucalyptus grandis Eucgr.I02308 Chr09 + View
Eutrema salsugineum Thhalv10026127m.g PF13441 - YMGG-like Gly-zipper (Gly-zipper_YMGG) scaffold_1 - View
Eutrema salsugineum Thhalv10022835m.g PF13441 - YMGG-like Gly-zipper (Gly-zipper_YMGG) scaffold_11 - View
Fragaria x ananassa FAN28G2817 PF13441//PF13639 - YMGG-like Gly-zipper (Gly-zipper_YMGG) // Ring finger domain (zf-RING_2) Fvb1-1 - View
Fragaria x ananassa FAN23G2982 PTHR14155//PTHR14155:SF120 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb1-3 + View
Fragaria x ananassa FAN19G2171 PTHR14155//PTHR14155:SF120 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb1-4 + View
Fragaria x ananassa FAN26G0294 PF13488 - Glycine zipper (Gly-zipper_Omp) Fvb1-2 + View
Fragaria vesca FvH4_1g11120 PTHR14155//PTHR14155:SF120 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb1 + View
Gossypium hirsutum Gohir.A11G171900 PTHR14155//PTHR14155:SF120 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED A11 + View
Gossypium hirsutum Gohir.D11G178800 PTHR14155//PTHR14155:SF180 - RING FINGER DOMAIN-CONTAINING // RING/U-BOX DOMAIN-CONTAINING PROTEIN-RELATED D11 + View
Gossypium hirsutum Gohir.D03G005700 PTHR14155//PTHR14155:SF120 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED D03 + View
Gossypium hirsutum Gohir.A02G174100 PTHR14155//PTHR14155:SF120 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED A02 - View
Glycine max Glyma.16G121900 PF13441 - YMGG-like Gly-zipper (Gly-zipper_YMGG) Gm16 + View
Glycine max Glyma.01G162900 PTHR14155//PTHR14155:SF146 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm01 + View
Glycine max Glyma.11G080500 PTHR14155//PTHR14155:SF120 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm11 - View
Glycine max Glyma.02G044300 PF13441//PF13639 - YMGG-like Gly-zipper (Gly-zipper_YMGG) // Ring finger domain (zf-RING_2) Gm02 + View
Gossypium raimondii Gorai.007G190700 Chr07 + View
Gossypium raimondii Gorai.003G006100 Chr03 + View
Helianthus annuus HanXRQChr09g0257201 Probable RING/U-box superfamily protein HanXRQChr09 + View
Lupinus albus Lalb_Chr09g0321471 PTHR14155//PTHR14155:SF146 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lalb_Chr09 + View
Lupinus albus Lalb_Chr17g0348501 PF13639 - Ring finger domain (zf-RING_2) Lalb_Chr17 - View
Lotus japonicus Lj4g0017899 PTHR14155//PTHR14155:SF102 - RING FINGER DOMAIN-CONTAINING // RING ZINC FINGER-CONTAINING PROTEIN chr4 + View
Lotus japonicus Lj2g0002819 PTHR14155//PTHR14155:SF144 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED chr2 - View
Lonicera japonica Lj2A484T46 GWHAAZE00000002 - View
Lonicera japonica Lj4A225T62 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_4_144221 PTHR14155//PTHR14155:SF120 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_2_75500 PTHR14155//PTHR14155:SF146 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_3_71041 PF13488 - Glycine zipper (Gly-zipper_Omp) Lsat_1_v8_lg_3 + View
Malus domestica MD02G1123800 RING/U-box superfamily protein Chr02 + View
Malus domestica MD15G1237800 RING/U-box superfamily protein Chr15 + View
Manihot esculenta Manes.02G110100 Chromosome02 - View
Manihot esculenta Manes.01G150600 Chromosome01 - View
Medicago truncatula Medtr5g022920 RING zinc finger protein, putative chr5 - View
Medicago truncatula Medtr8g074900 RING finger protein chr8 + View
Nelumbo nucifera Nn5g30840 chr5 - View
Nelumbo nucifera Nn6g31917 chr6 + View
Nicotiana tabacum Nitab4.5_0001561g0100 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0001561 + View
Nicotiana tabacum Nitab4.5_0002105g0040 Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type Nitab4.5_0002105 - View
Petunia axillaris Peaxi162Scf00328g00120 RING/U-box superfamily protein Peaxi162Scf00328 + View
Punica granatum PGR102G2081 NC_045129.1 + View
Punica granatum PGR119G2262 NC_045132.1 + View
Prunus persica Prupe.7G174700 Pp07 - View
Pisum sativum Psat4g102720 Ring finger domain chr4LG4 - View
Pisum sativum Psat2g152280 Glycine-zipper domain chr2LG1 + View
Papaver somniferum PSO210G6221 NC_039359.1 - View
Papaver somniferum PSO541G3198 NC_039363.1 - View
Papaver somniferum PSO170G6041 NC_039360.1 - View
Populus trichocarpa Potri.005G108200 PF13488//PF13639 - Glycine zipper (Gly-zipper_Omp) // Ring finger domain (zf-RING_2) Chr05 + View
Phaseolus vulgaris Phvul.003G267100 Chr03 - View
Phaseolus vulgaris Phvul.002G105100 PTHR14155//PTHR14155:SF120 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr02 + View
Quercus lobata QL06p051995 6 - View
Rosa chinensis RcHm_v2.0_Chr2g0098401 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0030300 chr08 + View
Rhododendron simsii Rhsim10G0206300 chr10 + View
Salix brachista Sabra05G0088600 GWHAAZH00000005 + View
Salix brachista Sabra02G0013700 GWHAAZH00000002 + View
Sechium edule Sed0009030 LG04 - View
Solanum lycopersicum Solyc02g083400.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1ML59_ARTAN) SL4.0ch02 + View
Solanum lycopersicum Solyc03g033330.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1ML59_ARTAN) SL4.0ch03 + View
Schrenkiella parvula Sp3g31140 PF13441//PF13639 - YMGG-like Gly-zipper (Gly-zipper_YMGG) // Ring finger domain (zf-RING_2) ch3-6 + View
Schrenkiella parvula Sp7g33620 PF13441//PF13639 - YMGG-like Gly-zipper (Gly-zipper_YMGG) // Ring finger domain (zf-RING_2) ch7-6 + View
Solanum pennellii Sopen02g028180 Intrinsic thylakoid membrane protein that fixes RPOTmp on the stromal side of the thylakoid membrane. | NEP-interacting protein 2 (NIP2) | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein . Spenn-ch02 + View
Solanum pennellii Sopen03g006110 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: NEP-interacting protein 2 Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400003661 RING-H2 finger protein ATL4M ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400022525 RING-H2 finger protein ATL4M ST4.03ch03 + View
Selenicereus undatus Hund16619 Scaffold_33677 - View
Trochodendron aralioides TAR628G0586 group5 - View
Trochodendron aralioides TAR381G1424 group11 + View
Theobroma cacao Thecc.01G011800 RING/U-box superfamily protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104807514 NEP1-interacting protein 1 isoform X1 NW_010963495.1 - View
Tarenaya hassleriana THA.LOC104819733 NEP1-interacting protein 1-like NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104826504 NEP1-interacting protein-like 1 isoform X1 NW_010960188.1 + View
Trifolium pratense TPR.G25117 Tp57577_TGAC_v2_LG2 - View
Trifolium pratense TPR.G19512 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI73G0608 NC_052232.1 - View
Tripterygium wilfordii TWI09G0532 NC_052245.1 + View
Vaccinium macrocarpon vmacro18439 Similar to NIP1: NEP1-interacting protein 1 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G3326 CM024069.1 - View
Vigna mungo VMungo1215G1143 CM024074.1 - View
Vitis vinifera GSVIVG01005189001 chrUn - View