Gene: AT2G17730
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G17730
- Transcript Identifier AT2G17730.1
- Gene Type Coding gene
- Location Chr2 : 7704142-7705312 : positive
Gene Family Information
- ID HOM05D001172
- #Genes/#Species 529/93
- Phylogenetic origin
- ID ORTHO05D001128
- #Genes/#Species 479/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G17730.1
- symbol NIP2
- uniprot Q8GT74
Descriptions
- Description NEP-interacting protein 2
- Computational description NEP-interacting protein 2 (NIP2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G35840.1); Has 9242 Blast hits to 9216 proteins in 266 species: Archae - 0; Bacteria - 2; Metazoa - 2260; Fungi - 688; Plants - 5081; Viruses - 18; Other Eukaryotes - 1193 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009299 | IPI | Gene Ontology | mRNA transcription | 1 |
| GO:0009416 | IEP | Gene Ontology | response to light stimulus | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0009535 | IEA | GOA Database | chloroplast thylakoid membrane | |
| GO:0009535 | IDA | Gene Ontology | chloroplast thylakoid membrane | 1 |
| GO:0031351 | IDA | Gene Ontology | integral component of plastid membrane | 1 |
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0009579 | IEA | GOA Database | thylakoid |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.3.3.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase |