Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G4020 LG-8 + View
Actinidia chinensis Actinidia13364 Lachesis_group10 - View
Arabidopsis lyrata AL3G29960 scaffold_3 + View
Avicennia marina MSTRG.21775 ScioBoG_3008_HRSCAF_3015 - View
Amaranthus hybridus Ah.13g072000 DNA-directed RNA polymerases II, IV and V subunit 9A AmaHy_arrow1_Scaffold_13 - View
Aquilegia oxysepala Aqoxy2G02775 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C4ZZV2 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2XVX11 PTHR11239//PTHR11239:SF15 - DNA-DIRECTED RNA POLYMERASE // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MX4EIU K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT3G16980 RNA polymerases M/15 Kd subunit One of two highly similar%2C non-catalytic subunits common to nuclear DNA-directed RNA polymerases II%2C IV and V%3B homologous to budding yeast RPB9. Appears to be redundant with At4g16265 NRPB9A%3B FUNCTIONS IN: DNA-directed RNA polymerase activity%2C transcription regulator activity%2C DNA binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: transcription%2C regulation of transcription%3B LOCATED IN: DNA-directed RNA polymerase V complex%2C DNA-directed RNA polymerase II%2C core complex%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C TFIIS-type (InterPro:IPR001222)%2C DNA-directed RNA polymerase%2C M/15kDa subunit (InterPro:IPR001529)%2C DNA-directed RNA polymerase M%2C 15kDa subunit%2C conserved site (InterPro:IPR019761)%3B BEST Arabidopsis thaliana protein match is: RNA polymerases M/15 Kd subunit (TAIR:AT4G16265.1)%3B Has 955 Blast hits to 950 proteins in 294 species: Archae - 163%3B Bacteria - 0%3B Metazoa - 246%3B Fungi - 231%3B Plants - 130%3B Viruses - 0%3B Other Eukaryotes - 185 (source: NCBI BLink). Chr3 + View
Beta vulgaris EL10Ac3g05464 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) Chr3_EL10_PGA_scaffold7 + View
Cicer arietinum L. Ca_01870_v3 Ca_LG1_v3 - View
Corylus avellana Haze_01277 Similar to NRPB9A: DNA-directed RNA polymerases II, IV and V subunit 9A (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc03_g00970 DNA-directed RNA polymerase II subunit RPB9 chr3 - View
Citrus clementina Ciclev10006256m.g scaffold_9 - View
Ceratophyllum demersum CDE02G0371 1 + View
Ceratophyllum demersum CDE09G0896 7 - View
Cardamine hirsuta CARHR092230 DNA-directed RNA polymerase subunit Chr3 + View
Carya illinoinensis CiPaw.01G139700 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) Chr01 - View
Citrullus lanatus ClCG05G006460 DNA-directed RNA polymerase subunit CG_Chr05 + View
Carica papaya Cpa.g.sc9.86 supercontig_9 - View
Chenopodium quinoa AUR62016130 NRPB9A: DNA-directed RNA polymerases II, IV and V subunit 9A C_Quinoa_Scaffold_3256 - View
Chenopodium quinoa AUR62041403 NRPB9A: DNA-directed RNA polymerases II, IV and V subunit 9A C_Quinoa_Scaffold_2159 - View
Capsella rubella Carub.0003s1673 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) scaffold_3 + View
Daucus carota DCAR_027008 hypothetical protein DCARv2_Chr8 + View
Daucus carota DCAR_023347 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv15193 GWHABJS00000016 - View
Davidia involucrata Dinv44302 GWHABJS00000014 + View
Durio zibethinus Duzib212G0477 NW_019168026.1 - View
Durio zibethinus Duzib052G0793 NW_019167849.1 - View
Erigeron canadensis ECA246G3323 Conyza_canadensis_scaffold:8 - View
Erythranthe guttata Migut.N00047 scaffold_14 - View
Eutrema salsugineum Thhalv10021989m.g K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) scaffold_13 - View
Fragaria x ananassa FAN07G2773 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) Fvb4-4 - View
Fragaria x ananassa FAN12G3053 PTHR11239//PTHR11239:SF15 - DNA-DIRECTED RNA POLYMERASE // SUBFAMILY NOT NAMED Fvb4-3 - View
Fragaria vesca FvH4_4g19480 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) Fvb4 + View
Gossypium hirsutum Gohir.A01G034300 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) A01 + View
Glycine max Glyma.09G037400 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) Gm09 - View
Glycine max Glyma.07G241200 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) Gm07 - View
Glycine max Glyma.15G142700 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) Gm15 - View
Hydrangea macrophylla Hma1.2p1_0013F.1_g008720 Hma1.2p1_0013F.1 - View
Lupinus albus Lalb_Chr18g0058831 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) Lalb_Chr18 - View
Lotus japonicus Lj4g0028172 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) chr4 + View
Lotus japonicus Lj6g0010863 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) chr6 + View
Lactuca sativa Lsat_1_v5_gn_6_116841 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) Lsat_1_v8_lg_6 + View
Malus domestica MD13G1156200 RNA polymerases M/15 Kd subunit Chr13 - View
Malus domestica MD16G1157100 RNA polymerases M/15 Kd subunit Chr16 - View
Manihot esculenta Manes.15G005400 Chromosome15 - View
Manihot esculenta Manes.03G202800 Chromosome03 + View
Medicago truncatula Medtr2g034520 DNA-directed RNA polymerase subunit chr2 - View
Nelumbo nucifera Nn4g25611 chr4 - View
Olea europaea Oeu016485.1 chr22 + View
Oryza sativa ssp. japonica Os12g0560400 Similar to DNA-directed RNA polymerase II 14.5 kDa polypeptide (EC 2.7.7.6) (RPB9) (RPB14.5). chr12 + View
Punica granatum PGR004G2507 NC_045131.1 - View
Prunus persica Prupe.1G122000 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) Pp01 - View
Papaver somniferum PSO761G0124 NW_020622381.1 - View
Papaver somniferum PSO210G6722 NC_039359.1 + View
Populus trichocarpa Potri.008G106900 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) Chr08 - View
Populus trichocarpa Potri.010G142500 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) Chr10 + View
Phaseolus vulgaris Phvul.003G112600 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) Chr03 + View
Phaseolus vulgaris Phvul.009G256100 K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) Chr09 + View
Quercus lobata QL06p011635 6 + View
Rosa chinensis RcHm_v2.0_Chr4g0424591 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim02G0004900 chr02 - View
Striga asiatica SGA_v2.0_scaffold119G32662 scaffold119 - View
Salix brachista Sabra10G0110300 GWHAAZH00000010 + View
Salix brachista Sabra08G0080800 GWHAAZH00000008 - View
Sechium edule Sed0001961 LG02 - View
Sechium edule Sed0006030 LG12 - View
Solanum tuberosum PGSC0003DMG400027213 DNA-directed RNA polymerase subunit ST4.03ch05 - View
Selenicereus undatus Hund03115 Scaffold_19641 + View
Selenicereus undatus Hund11961 Scaffold_33679 + View
Theobroma cacao Thecc.04G297700 RNA polymerases M/15 Kd subunit Chromosome_4 + View
Tarenaya hassleriana THA.LOC104820300 DNA-directed RNA polymerases II%2C IV and V subunit 9B NW_010966178.1 + View
Tripterygium wilfordii TWI09G0163 NC_052245.1 + View
Tripterygium wilfordii TWI73G0828 NC_052232.1 - View
Vaccinium macrocarpon vmacro15189 Similar to NRPB9A: DNA-directed RNA polymerases II, IV and V subunit 9A (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G2752 CM024074.1 - View
Vigna mungo VMungo1309G0143 CM024072.1 - View
Vitis vinifera GSVIVG01035016001 chr5 - View
Zea mays Zm00001eb137030 Zm00001e125271 DNA-directed RNA polymerase subunit 3 + View