Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0032788 PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Vitis vinifera] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL2G39540 scaffold_2 - View
Avicennia marina MSTRG.7057 ScioBoG_102840_HRSCAF_103099 - View
Arabidopsis thaliana AT1G79080 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1)%3B Has 46001 Blast hits to 12732 proteins in 282 species: Archae - 3%3B Bacteria - 36%3B Metazoa - 518%3B Fungi - 600%3B Plants - 43410%3B Viruses - 0%3B Other Eukaryotes - 1434 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC08g47471 ChrC08 - View
Brassica carinata BcaNung04908 Contig1779 + View
Brassica napus A07p44220 A07 - View
Brassica napus C06p52950 C06 - View
Brassica oleracea BolC6t40313H C6 - View
Brassica rapa BraA07t31930Z A07 - View
Capsicum annuum CAN.G943.32 PGAv.1.6.scaffold943 - View
Cicer arietinum L. Ca_03688_v3 Ca_LG1_v3 + View
Coffea canephora Cc05_g15990 Pentatricopeptide repeat-containing protein At1g79080, chloroplastic chr5 - View
Citrus clementina Ciclev10019503m.g scaffold_3 - View
Carpinus fangiana Cfa019430 Cfa08 + View
Citrullus lanatus ClCG11G016340 Pentatricopeptide repeat-containing protein CG_Chr11 - View
Cucumis melo MELO3C010560.2 Pentatricopeptide repeat-containing family protein chr07 + View
Carica papaya Cpa.g.sc10.35 supercontig_10 - View
Daucus carota DCAR_013746 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_016820 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv42519 GWHABJS00000013 + View
Davidia involucrata Dinv19625 GWHABJS00000001 - View
Durio zibethinus Duzib187G1351 NW_019167860.1 + View
Erigeron canadensis ECA240G0851 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.F03183 Chr06 + View
Erythranthe guttata Migut.M01563 scaffold_13 + View
Fragaria x ananassa FAN11G3197 K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Fvb3-4 - View
Fragaria x ananassa FAN25G3485 K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Fvb3-1 - View
Fragaria x ananassa FAN16G1729 PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Fvb3-3 + View
Fragaria vesca FvH4_3g15990 K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Fvb3 + View
Glycine max Glyma.15G254900 PF13041 - PPR repeat family (PPR_2) Gm15 + View
Gossypium raimondii Gorai.009G354800 Chr09 + View
Helianthus annuus HanXRQChr05g0161001 Probable pentatricopeptide repeat (PPR) superfamily protein HanXRQChr05 + View
Lupinus albus Lalb_Chr01g0007081 PF13041 - PPR repeat family (PPR_2) Lalb_Chr01 - View
Lupinus albus Lalb_Chr25g0285091 PF13041 - PPR repeat family (PPR_2) Lalb_Chr25 - View
Lupinus albus Lalb_Chr19g0133401 PF13041 - PPR repeat family (PPR_2) Lalb_Chr19 + View
Lotus japonicus Lj3g0009186 PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) chr3 - View
Lactuca sativa Lsat_1_v5_gn_7_72161 Lsat_1_v8_lg_7 + View
Malus domestica MD10G1198700 Pentatricopeptide repeat (PPR) superfamily protein Chr10 - View
Malus domestica MD05G1216400 Pentatricopeptide repeat (PPR) superfamily protein Chr05 - View
Manihot esculenta Manes.14G015600 Chromosome14 + View
Medicago truncatula Medtr2g069680 PPR containing plant-like protein chr2 + View
Nicotiana tabacum Nitab4.5_0001749g0050 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0001749 + View
Petunia axillaris Peaxi162Scf00452g00086 Pentatricopeptide repeat (PPR) superfamily protein Peaxi162Scf00452 + View
Punica granatum PGR031G3805 NC_045127.1 + View
Prunus persica Prupe.4G143000 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Pp04 + View
Populus trichocarpa Potri.011G144300 PF13041 - PPR repeat family (PPR_2) Chr11 + View
Populus trichocarpa Potri.001G457300 PF13041 - PPR repeat family (PPR_2) Chr01 - View
Rosa chinensis RcHm_v2.0_Chr5g0026921 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim04G0005900 chr04 + View
Striga asiatica SGA_v2.0_scaffold7G03576 scaffold7 + View
Salvia bowleyana SalBow8G1439 GWHASIU00000004 - View
Sechium edule Sed0019951 LG06 - View
Solanum lycopersicum Solyc07g066390.1 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QE10_9MAGN) SL4.0ch07 - View
Schrenkiella parvula Sp5g34130 PF13041 - PPR repeat family (PPR_2) ch5-7 - View
Solanum pennellii Sopen07g034560 Pentatricopeptide repeat (PPR) superfamily protein | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400022129 Pentatricopeptide repeat-containing protein ST4.03ch07 - View
Theobroma cacao Thecc.07G154400 Chromosome_7 + View
Tarenaya hassleriana THA.LOC104808118 pentatricopeptide repeat-containing protein At1g79080%2C chloroplastic NW_010964598.1 - View
Trifolium pratense TPR.G9740 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI38G1170 NC_052252.1 - View