Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.6e-64 250.8 120 100.0
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 3.7e-63 246.9 120 98.3
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 1.1e-51 208.8 119 81.5
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 5.6e-51 206.5 119 80.7
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 5.1e-44 183.3 120 71.7
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.5e-43 181.8 120 70.8
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 5.6e-43 179.9 120 65.8
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 9.6e-43 179.1 120 70.8
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 3.6e-42 177.2 120 68.3
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 6.2e-42 176.4 120 65.8
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 1.4e-41 175.3 120 66.7
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 3.1e-41 174.1 121 70.2
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 5.2e-41 173.3 120 66.7
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 1.2e-40 172.2 120 66.7
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.5e-40 171.8 112 67.9
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 2.6e-40 171.0 120 65.8
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 9.9e-40 169.1 120 67.5
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 1.3e-39 168.7 120 62.5
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 1.7e-39 168.3 120 63.3
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 2.9e-39 167.5 119 65.5
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 2.9e-39 167.5 113 69.0
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 3.8e-39 167.2 119 63.9
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 3.8e-39 167.2 120 61.7
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 3.8e-39 167.2 120 61.7
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 8.4e-39 166.0 120 63.3
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 1.9e-38 164.9 121 66.1
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 2.4e-38 164.5 119 63.9
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 7.1e-38 162.9 117 66.7
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 7.1e-38 162.9 120 64.2
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 9.3e-38 162.5 119 61.3
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 9.3e-38 162.5 119 61.3
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 1.2e-37 162.2 119 63.9
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 3.5e-37 160.6 120 63.3
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 4.6e-37 160.2 121 62.0
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 6.0e-37 159.8 122 63.1
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 7.8e-37 159.5 119 62.2
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 1.0e-36 159.1 122 62.3
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 1.7e-36 158.3 113 63.7
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.3e-36 157.9 119 63.9
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.3e-36 157.9 119 63.9
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 3.9e-36 157.1 117 60.7
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 3.9e-36 157.1 117 60.7
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 5.1e-36 156.8 119 63.9
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 5.1e-36 156.8 119 63.9
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 5.1e-36 156.8 120 61.7
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 6.6e-36 156.4 121 65.3
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 6.6e-36 156.4 122 62.3
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 8.7e-36 156.0 119 59.7
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 8.7e-36 156.0 120 62.5
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 8.7e-36 156.0 119 63.9
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 1.5e-35 155.2 122 60.7
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 7.3e-35 152.9 122 60.7
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 1.3e-34 152.1 121 62.8
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 1.6e-34 151.8 113 61.9
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 1.6e-34 151.8 128 59.4
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 2.8e-34 151.0 124 60.5
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 6.2e-34 149.8 128 59.4
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 6.2e-34 149.8 122 61.5
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 1.4e-33 148.7 127 58.3
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 2.4e-33 147.9 128 58.6
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 2.4e-33 147.9 128 58.6
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 3.1e-33 147.5 113 60.2
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 5.3e-33 146.7 128 61.7
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 5.3e-33 146.7 119 58.8
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 6.9e-33 146.4 116 63.8
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 1.2e-32 145.6 113 59.3
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 1.5e-32 145.2 113 58.4
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 1.3e-31 142.1 121 56.2
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 3.8e-31 140.6 115 56.5
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 2.4e-30 137.9 115 56.5
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 7.1e-30 136.3 70 85.7
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 1.2e-29 135.6 134 54.5
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 3.5e-29 134.0 122 54.1
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 7.9e-29 132.9 125 53.6
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 3.0e-28 131.0 85 69.4
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 8.7e-28 129.4 121 52.9
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 1.9e-27 128.3 125 54.4
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 3.3e-27 127.5 123 50.4
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 1.6e-26 125.2 123 49.6
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 4.8e-26 123.6 126 48.4
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 5.3e-25 120.2 119 56.3
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 6.9e-25 119.8 132 50.8
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 5.8e-24 116.7 133 49.6
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 7.6e-24 116.3 71 69.0
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 6.4e-23 113.2 132 49.2
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 6.4e-23 113.2 135 48.1
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 8.4e-23 112.8 117 47.9
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 1.9e-22 111.7 130 46.9
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 4.2e-22 110.5 128 49.2
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 9.3e-22 109.4 124 46.8
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 2.1e-21 108.2 133 47.4
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 1.5e-19 102.1 123 46.3
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 1.5e-19 102.1 123 46.3
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 1.6e-18 98.6 130 46.2
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 1.6e-18 98.6 122 44.3
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 1.6e-18 98.6 126 44.4
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 2.1e-18 98.2 122 44.3
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 2.4e-17 94.7 74 56.8
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 4.5e-16 90.5 120 38.3
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 7.6e-16 89.7 120 38.3
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 2.2e-15 88.2 121 42.1
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 3.2e-14 84.3 99 43.4
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 6.7e-12 76.6 43 74.4
SalBow8G1439 Salvia bowleyana HOM05D006918 ORTHO05D008525 3.8e-07 60.8 185 90.3
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 5.0e-07 60.5 37 75.7
ECA240G0851 Erigeron canadensis HOM05D006918 ORTHO05D008525 1.9e-06 58.5 33 81.8


User provided reference genes

Program Settings