Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0022598 nucleic acid binding protein, putative [Ricinus communis] Contig1221 - View
CSS0026046 nucleic acid binding protein, putative [Ricinus communis] Contig1197 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G23950 LG-1 - View
Acer truncatum Atru.chr1.1048 chr1 - View
Acer truncatum Atru.chr3.2721 chr3 + View
Actinidia chinensis Actinidia19393 Lachesis_group0 - View
Actinidia chinensis Actinidia24524 Lachesis_group18 + View
Actinidia chinensis Actinidia09352 Lachesis_group5 + View
Arabidopsis lyrata AL4G40240 scaffold_4 + View
Avicennia marina MSTRG.6441 ScioBoG_102839_HRSCAF_103093 + View
Avicennia marina MSTRG.19877 ScioBoG_25048_HRSCAF_25167 + View
Amaranthus hybridus Ah.13g076300 Zinc finger CCCH domain-containing protein 30 (AtC3H30) AmaHy_arrow1_Scaffold_13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C42N0A PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QP4B54 PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT2G41900 CCCH-type zinc finger protein with ARM repeat domain-containing protein CCCH-type zinc finger protein with ARM repeat domain%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%2C Ankyrin repeat-containing domain (InterPro:IPR020683)%2C Ankyrin repeat (InterPro:IPR002110)%3B BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1)%3B Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10%3B Bacteria - 312%3B Metazoa - 2497%3B Fungi - 280%3B Plants - 489%3B Viruses - 8%3B Other Eukaryotes - 1803 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaC02g07278 ChrC02 - View
Brassica carinata BcaB06g29216 ChrB06 + View
Brassica carinata BcaC06g32429 ChrC06 - View
Brassica napus A04p31900 A04 + View
Brassica napus C03p27980 C03 + View
Brassica napus A10p29240 A10 + View
Brassica napus C09p69630 C09 + View
Brassica napus C04p69370 C04 + View
Brassica oleracea BolC9t59706H C9 + View
Brassica oleracea BolC4t28437H C4 + View
Brassica rapa BraA10t44970Z A10 + View
Brassica rapa BraA03t11562Z A03 + View
Brassica rapa BraA04t18648Z A04 + View
Beta vulgaris EL10Ac4g10250 PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Chr4_EL10_PGA_scaffold1 + View
Beta vulgaris EL10Ac2g04330 PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Chr2_EL10_PGA_scaffold6 - View
Beta vulgaris EL10Ac3g07028 PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 Chr3_EL10_PGA_scaffold7 - View
Capsicum annuum CAN.G128.16 PGAv.1.6.scaffold128 + View
Cannabis sativa CANSAT80G0084 NC_044372.1 + View
Cannabis sativa CANSAT80G2820 NC_044372.1 + View
Cicer arietinum L. Ca_08475_v3 Ca_LG3_v3 + View
Corylus avellana Haze_23138 Similar to At5g12850: Zinc finger CCCH domain-containing protein 56 (Arabidopsis thaliana OX%3D3702) 6 + View
Corylus avellana Haze_19899 Similar to At2g41900: Zinc finger CCCH domain-containing protein 30 (Arabidopsis thaliana OX%3D3702) 10 + View
Coffea canephora Cc06_g16960 Zinc finger CCCH domain-containing protein 30 chr6 + View
Citrus clementina Ciclev10004423m.g scaffold_9 + View
Citrus clementina Ciclev10030816m.g scaffold_4 + View
Carpinus fangiana Cfa016848 Cfa07 + View
Carpinus fangiana Cfa009772 Cfa04 + View
Cardamine hirsuta CARHR136990 Zinc finger CCCH domain-containing protein Chr4 + View
Carya illinoinensis CiPaw.09G036000 PTHR14493//PTHR14493:SF43 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 Chr09 - View
Carya illinoinensis CiPaw.13G005000 PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Chr13 - View
Carya illinoinensis CiPaw.10G031700 PTHR14493//PTHR14493:SF43 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 Chr10 - View
Citrullus lanatus ClCG10G017110 Zinc finger CCCH domain-containing protein CG_Chr10 + View
Citrullus lanatus ClCG10G012350 Zinc finger CCCH domain-containing protein CG_Chr10 + View
Cucumis melo MELO3C023977.2 zinc finger CCCH domain-containing protein 30-like chr04 + View
Carica papaya Cpa.g.sc92.23 supercontig_92 - View
Chenopodium quinoa AUR62019300 At5g12850: Zinc finger CCCH domain-containing protein 56 C_Quinoa_Scaffold_3107 - View
Chenopodium quinoa AUR62026002 Protein of unknown function C_Quinoa_Scaffold_3792 - View
Chenopodium quinoa AUR62024411 At2g41900: Zinc finger CCCH domain-containing protein 30 C_Quinoa_Scaffold_2876 - View
Capsella rubella Carub.0004s2421 PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 scaffold_4 + View
Cucumis sativus L. CsaV3_3G039280 zinc finger CCCH domain-containing protein 30 chr3 - View
Cucumis sativus L. CsaV3_3G032140 zinc finger CCCH domain-containing protein 30-like chr3 + View
Daucus carota DCAR_020476 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv18071 GWHABJS00000015 - View
Davidia involucrata Dinv43444 GWHABJS00000016 + View
Davidia involucrata Dinv09355 GWHABJS00000020 + View
Davidia involucrata Dinv36260 GWHABJS00000007 + View
Davidia involucrata Dinv22179 GWHABJS00000003 - View
Davidia involucrata Dinv01669 GWHABJS00000021 + View
Durio zibethinus Duzib106G0091 NW_019168492.1 + View
Durio zibethinus Duzib170G0521 NW_019167871.1 - View
Durio zibethinus Duzib138G0058 NW_019167893.1 - View
Durio zibethinus Duzib093G0914 NW_019167937.1 + View
Durio zibethinus Duzib128G0577 NW_019168481.1 + View
Erigeron canadensis ECA248G2539 Conyza_canadensis_scaffold:9 + View
Erigeron canadensis ECA248G1491 Conyza_canadensis_scaffold:9 + View
Eucalyptus grandis Eucgr.A02384 Chr01 + View
Erythranthe guttata Migut.J01774 scaffold_10 + View
Eutrema salsugineum Thhalv10016315m.g PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 scaffold_10 + View
Fragaria x ananassa FAN06G0543 PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Fvb7-2 - View
Fragaria vesca FvH4_7g01060 PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Fvb7 - View
Gossypium hirsutum Gohir.D03G066900 PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 D03 - View
Gossypium hirsutum Gohir.A09G123800 PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) A09 + View
Gossypium hirsutum Gohir.D09G120600 PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) D09 + View
Gossypium hirsutum Gohir.D01G121400 PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 D01 + View
Glycine max Glyma.15G274800 PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Gm15 - View
Glycine max Glyma.13G202800 PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Gm13 + View
Glycine max Glyma.03G138600 PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 Gm03 + View
Glycine max Glyma.19G141700 PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 Gm19 + View
Glycine max Glyma.10G100400 PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) Gm10 - View
Glycine max Glyma.12G237300 PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Gm12 + View
Gossypium raimondii Gorai.003G093600 Chr03 + View
Gossypium raimondii Gorai.006G138100 Chr06 + View
Helianthus annuus HanXRQChr13g0390701 Putative zinc finger, CCCH-type; Ankyrin repeat-containing domain HanXRQChr13 - View
Lupinus albus Lalb_Chr01g0017481 PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) Lalb_Chr01 + View
Lupinus albus Lalb_Chr25g0287401 PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) Lalb_Chr25 + View
Lupinus albus Lalb_Chr03g0034081 PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Lalb_Chr03 - View
Lotus japonicus Lj1g0004818 PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) chr1 - View
Lotus japonicus Lj3g0025563 PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 chr3 + View
Lotus japonicus Lj3g0005037 PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 chr3 - View
Lonicera japonica Lj2P380T43 GWHAAZE00000002 - View
Lonicera japonica Lj7P570T44 GWHAAZE00000007 - View
Lactuca sativa Lsat_1_v5_gn_9_27341 Lsat_1_v8_lg_9 + View
Lactuca sativa Lsat_1_v5_gn_5_162440 PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 Lsat_1_v8_lg_5 - View
Magnolia biondii MBI01_g32960_MAGBIO AED:0.05 Chr01 - View
Malus domestica MD14G1068200 CCCH-type zinc finger protein with ARM repeat domain Chr14 - View
Malus domestica MD12G1068100 CCCH-type zinc finger protein with ARM repeat domain Chr12 - View
Malus domestica MD03G1175400 CCCH-type zinc finger protein with ARM repeat domain Chr03 + View
Manihot esculenta Manes.10G142900 Chromosome10 + View
Manihot esculenta Manes.08G048800 Chromosome08 - View
Manihot esculenta Manes.14G002700 Chromosome14 - View
Manihot esculenta Manes.09G024900 Chromosome09 + View
Medicago truncatula Medtr7g092070 ARM repeat CCCH-type zinc finger protein chr7 + View
Nicotiana tabacum Nitab4.5_0000634g0230 Ankyrin repeat-containing domain, Ankyrin repeat, Thiolase-like, subgroup, FAE1/Type III polyketide synthase-like protein, Thiolase-like Nitab4.5_0000634 - View
Olea europaea Oeu008135.1 chr2 + View
Olea europaea Oeu033784.1 chr17 - View
Petunia axillaris Peaxi162Scf00003g10415 Zinc finger CCCH domain-containing protein 30 Peaxi162Scf00003 + View
Punica granatum PGR004G0271 NC_045131.1 - View
Punica granatum PGR119G2258 NC_045132.1 - View
Prunus persica Prupe.7G065800 Pp07 + View
Pisum sativum Psat3g071800 Ankyrin repeats (3 copies) chr3LG5 + View
Papaver somniferum PSO339G2922 NC_039366.1 - View
Populus trichocarpa Potri.006G053800 PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 Chr06 + View
Populus trichocarpa Potri.016G053700 PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) Chr16 - View
Populus trichocarpa Potri.001G266700 PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Chr01 + View
Phaseolus vulgaris Phvul.005G022000 PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Chr05 - View
Phaseolus vulgaris Phvul.011G211700 PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Chr11 + View
Phaseolus vulgaris Phvul.007G254100 PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) Chr07 + View
Quercus lobata QL07p021244 7 + View
Quercus lobata QL01p004711 1 + View
Rosa chinensis RcHm_v2.0_Chr3g0481371 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim07G0055800 chr07 - View
Striga asiatica SGA_v2.0_scaffold105G30437 scaffold105 + View
Salvia bowleyana SalBow6G3868 GWHASIU00000002 + View
Salix brachista Sabra09G0045000 GWHAAZH00000009 + View
Simmondsia chinensis Sc09g0000710 GWHAASQ00000009 - View
Simmondsia chinensis Sc11g0009170 GWHAASQ00000011 + View
Simmondsia chinensis Sc19g0006730 GWHAASQ00000019 - View
Sechium edule Sed0025567 LG02 + View
Sechium edule Sed0020502 LG04 + View
Sechium edule Sed0011049 LG12 + View
Solanum lycopersicum Solyc10g080260.3 Zinc finger transcription factor 62 SL4.0ch10 + View
Solanum lycopersicum Solyc01g087170.3 Zinc finger transcription factor 11 SL4.0ch01 - View
Schrenkiella parvula Sp4g24170 PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 ch4-6 + View
Solanum pennellii Sopen01g034230 CCCH-type zinc finger protein with ARM repeat domain | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type , Ankyrin repeat-containing domain , Ankyrin repeat | BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain Spenn-ch01 - View
Solanum pennellii Sopen10g030850 CCCH-type zinc finger protein with ARM repeat domain | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type , Ankyrin repeat-containing domain , Ankyrin repeat | BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain Spenn-ch10 + View
Solanum tuberosum PGSC0003DMG400006803 Nucleic acid binding protein ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400023719 Nucleic acid binding protein ST4.03ch10 - View
Selenicereus undatus Hund24728 Scaffold_3410 + View
Trochodendron aralioides TAR633G0623 group2 - View
Trochodendron aralioides TAR369G1083 group18 - View
Theobroma cacao Thecc.05G160400 C3HL domain class transcription factor Chromosome_5 + View
Tarenaya hassleriana THA.LOC104802249 zinc finger CCCH domain-containing protein 30 NW_010960188.1 + View
Tarenaya hassleriana THA.LOC104824455 zinc finger CCCH domain-containing protein 30-like NW_010966881.1 + View
Tripterygium wilfordii TWI74G0414 NC_052234.1 - View
Tripterygium wilfordii TWI53G1661 NC_052244.1 + View
Tripterygium wilfordii TWI34G0634 NC_052235.1 + View
Tripterygium wilfordii TWI77G0670 NC_052236.1 + View
Utricularia gibba unitig_8.g3511 unitig_8 + View
Vaccinium macrocarpon vmacro22369 Similar to At2g41900: Zinc finger CCCH domain-containing protein 30 (Arabidopsis thaliana OX%3D3702) scaffold00342_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro13667 Similar to At2g41900: Zinc finger CCCH domain-containing protein 30 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1127G1759 CM024076.1 + View
Vigna mungo VMungo0720G1704 CM024071.1 - View
Vigna mungo VMungo1080G0456 CM024079.1 + View
Vitis vinifera GSVIVG01033316001 chr8 - View
Vitis vinifera GSVIVG01032093001 chr13 + View