Gene: Carub.0004s2421

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0004s2421
  • Transcript Identifier Carub.0004s2421.1
  • Gene Type Coding gene
  • Location scaffold_4 : 12628721-12630886 : positive

Gene Family Information

  • ID HOM05D000377
  • #Genes/#Species 1292/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0004s2421.v1.1
  • pacid 39238052
  • synonym Carubv10022702m.g

Descriptions

  • Description PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1902074
ISO
PLAZA Integrative Orthologyresponse to salt AT2G41900
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G41900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
InterPrometal ion binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G41900
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G41900

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000571 Zinc finger, CCCH-type
IPR002110 Ankyrin repeat
IPR036770 Ankyrin repeat-containing domain superfamily
IPR020683 Ankyrin repeat-containing domain
Mapman id Description
16.8.2 RNA processing.mRNA sequestration.mRNA-binding regulatory factor (TZF)