Gene: Potri.016G053700
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.016G053700
- Transcript Identifier Potri.016G053700.3
- Gene Type Coding gene
- Location Chr16 : 3524455-3526653 : negative
Gene Family Information
- ID HOM05D000377
- #Genes/#Species 1292/100
- Phylogenetic origin
- ID ORTHO05D001957
- #Genes/#Species 333/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.016G053700.v4.1
- pacid 42808968
- synonym POPTR_0016s05410
Descriptions
- Description PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1902074 | ISO | PLAZA Integrative Orthology | response to salt | AT2G41900 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT5G12850 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G41900 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G12850 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.8.2 | RNA processing.mRNA sequestration.mRNA-binding regulatory factor (TZF) |