Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr3.2884 chr3 - View
Arabidopsis lyrata AL6G32780 scaffold_6 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LSK0UK PTHR22792//PTHR22792:SF68 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1A arahy.Tifrunner.gnm1.Arahy.07 + View
Arabidopsis thaliana AT5G21160 LA RNA-binding protein Encodes a protein with sequence similarity to mRNA binding proteins from humans. LARP1a is involved in mRNA degradation in response to heat stress. Upon heat stress LARP1a interacts with XRN4 and appears to be responsible for addressing XRN4 to the polysome. LARP1/XRN4 double mutants are impaired in thermotolerance and lower levels of heat induced RNA turnover. LA RNA-binding protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cytosol%2C nucleus%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C RNA-binding protein Lupus La (InterPro:IPR006630)%2C Protein of unknown function DM15 (InterPro:IPR006607)%3B BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT4G35890.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC04g19520 ChrC04 + View
Brassica oleracea BolC2t07110H C2 - View
Cicer arietinum L. Ca_06162_v3 Ca_LG2_v3 - View
Coffea canephora Cc01_g06920 Putative uncharacterized protein chr1 + View
Citrus clementina Ciclev10014180m.g scaffold_2 - View
Carya illinoinensis CiPaw.13G121400 PTHR22792//PTHR22792:SF68 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1A Chr13 - View
Corchorus olitorius COL.COLO4_18350 hypothetical protein AWUE01016449.1 + View
Capsella rubella Carub.0006s1947 PTHR22792//PTHR22792:SF68 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1A scaffold_6 - View
Durio zibethinus Duzib168G1797 NW_019168159.1 + View
Durio zibethinus Duzib170G0755 NW_019167871.1 - View
Eucalyptus grandis Eucgr.B03778 Chr02 + View
Eutrema salsugineum Thhalv10012690m.g PTHR22792:SF68 - LA-RELATED PROTEIN 1A scaffold_2 - View
Gossypium hirsutum Gohir.D03G133700 PTHR22792//PTHR22792:SF68 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1A D03 - View
Gossypium hirsutum Gohir.A03G034600 PTHR22792//PTHR22792:SF68 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1A A03 + View
Gossypium hirsutum Gohir.A05G101900 PTHR22792//PTHR22792:SF68 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1A A05 - View
Glycine max Glyma.02G275300 PTHR22792//PTHR22792:SF68 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1A Gm02 - View
Glycine max Glyma.14G040900 PTHR22792//PTHR22792:SF68 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1A Gm14 + View
Gossypium raimondii Gorai.003G140800 Chr03 - View
Lupinus albus Lalb_Chr04g0249621 PTHR22792//PTHR22792:SF68 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1A Lalb_Chr04 + View
Lupinus albus Lalb_Chr17g0347591 PTHR22792:SF68 - LA-RELATED PROTEIN 1A Lalb_Chr17 - View
Lotus japonicus LjContig00564g0003968 PTHR22792//PTHR22792:SF68 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1A Contig00564 + View
Medicago truncatula Medtr5g088005 LA RNA-binding protein chr5 + View
Punica granatum PGR102G0053 NC_045129.1 - View
Prunus persica Prupe.6G155800 Pp06 - View
Populus trichocarpa Potri.001G220100 PTHR22792//PTHR22792:SF68 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 1A Chr01 - View
Phaseolus vulgaris Phvul.008G206300 PTHR22792:SF68 - LA-RELATED PROTEIN 1A Chr08 + View
Quercus lobata QL01p007505 1 + View
Theobroma cacao Thecc.09G338800 Lupus la ribonucleoprotein Chromosome_9 - View
Tripterygium wilfordii TWI79G0397 NC_052238.1 - View
Tripterygium wilfordii TWI31G1498 NC_052233.1 + View