Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0027950 PREDICTED: vacuolar protein sorting-associated protein 26A [Nicotiana tomentosiformis] Chr7 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G9720 LG-3 - View
Acer truncatum Atru.chr12.2318 chr12 - View
Actinidia chinensis Actinidia34250 Lachesis_group3 - View
Actinidia chinensis Actinidia18673 Lachesis_group3 - View
Actinidia chinensis Actinidia08676 Lachesis_group6 + View
Arabidopsis lyrata AL8G28260 scaffold_8 - View
Arabidopsis lyrata AL7G24970 scaffold_7 - View
Avicennia marina MSTRG.8630 ScioBoG_11560_HRSCAF_11609 + View
Arabidopsis thaliana AT4G27690 vacuolar protein sorting 26B vacuolar protein sorting 26B (VPS26B)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: intracellular protein transport%2C vacuolar transport%2C retrograde transport%2C endosome to Golgi%3B LOCATED IN: retromer complex%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 26 (InterPro:IPR005377)%3B BEST Arabidopsis thaliana protein match is: vacuolar protein sorting 26A (TAIR:AT5G53530.1)%3B Has 795 Blast hits to 794 proteins in 227 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 406%3B Fungi - 146%3B Plants - 106%3B Viruses - 0%3B Other Eukaryotes - 137 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT5G53530 vacuolar protein sorting 26A Homolog of yeast retromer subunit VPS26. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. vacuolar protein sorting 26A (VPS26A)%3B CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 26 (InterPro:IPR005377)%3B BEST Arabidopsis thaliana protein match is: vacuolar protein sorting 26B (TAIR:AT4G27690.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB08g35717 ChrB08 - View
Brassica carinata BcaC03g14409 ChrC03 + View
Brassica napus A01p19130 A01 + View
Brassica napus C09p43410 C09 - View
Brassica napus A02p11000 A02 + View
Brassica oleracea BolC2t07955H C2 + View
Brassica oleracea BolC9t57225H C9 - View
Brassica rapa BraA02t06165Z A02 + View
Brassica rapa BraA10t43188Z A10 - View
Cannabis sativa CANSAT21G1205 NC_044374.1 - View
Corylus avellana Haze_00264 Similar to VPS26A: Vacuolar protein sorting-associated protein 26A (Arabidopsis thaliana OX%3D3702) 1 - View
Citrus clementina Ciclev10021339m.g scaffold_3 - View
Cardamine hirsuta CARHR235420 Vacuolar protein sorting-associated protein 26 Chr7 + View
Cardamine hirsuta CARHR266670 Vacuolar protein sorting-associated protein 26-like protein Chr8 - View
Carya illinoinensis CiPaw.05G201200 K18466 - vacuolar protein sorting-associated protein 26 (VPS26) Chr05 - View
Carya illinoinensis CiPaw.06G043700 K18466 - vacuolar protein sorting-associated protein 26 (VPS26) Chr06 + View
Corchorus olitorius COL.COLO4_16826 Vacuolar protein sorting-associated protein 26 AWUE01016255.1 - View
Carica papaya Cpa.g.sc3.125 supercontig_3 - View
Capsella rubella Carub.0008s1370 K18466 - vacuolar protein sorting-associated protein 26 (VPS26) scaffold_8 - View
Capsella rubella Carub.0007s1313 K18466 - vacuolar protein sorting-associated protein 26 (VPS26) scaffold_7 - View
Daucus carota DCAR_020349 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv29240 GWHABJS00000004 + View
Davidia involucrata Dinv35364 GWHABJS00000009 + View
Durio zibethinus Duzib084G1223 NW_019167827.1 + View
Durio zibethinus Duzib205G0235 NW_019168381.1 - View
Erigeron canadensis ECA232G1322 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.K00411 Chr11 - View
Erythranthe guttata Migut.F01008 scaffold_6 + View
Erythranthe guttata Migut.F00173 scaffold_6 + View
Eutrema salsugineum Thhalv10025828m.g scaffold_1 - View
Eutrema salsugineum Thhalv10014219m.g K18466 - vacuolar protein sorting-associated protein 26 (VPS26) scaffold_2 + View
Fragaria x ananassa FAN03G1651 K18466 - vacuolar protein sorting-associated protein 26 (VPS26) Fvb7-3 + View
Fragaria x ananassa FAN10G2660 K18466 - vacuolar protein sorting-associated protein 26 (VPS26) Fvb7-1 - View
Fragaria x ananassa FAN01G2702 K18466 - vacuolar protein sorting-associated protein 26 (VPS26) Fvb7-4 + View
Fragaria x ananassa FAN10G2872 K18466 - vacuolar protein sorting-associated protein 26 (VPS26) Fvb7-1 - View
Fragaria vesca FvH4_7g32410 K18466 - vacuolar protein sorting-associated protein 26 (VPS26) Fvb7 - View
Gossypium hirsutum Gohir.A09G186000 KOG3063 - Membrane coat complex Retromer, subunit VPS26 A09 - View
Gossypium hirsutum Gohir.D12G248300 K18466 - vacuolar protein sorting-associated protein 26 (VPS26) D12 + View
Gossypium hirsutum Gohir.D09G181000 KOG3063 - Membrane coat complex Retromer, subunit VPS26 D09 - View
Gossypium hirsutum Gohir.A12G247600 K18466 - vacuolar protein sorting-associated protein 26 (VPS26) A12 + View
Gossypium raimondii Gorai.008G266300 Chr08 + View
Gossypium raimondii Gorai.004G121900 Chr04 + View
Gossypium raimondii Gorai.006G203000 Chr06 - View
Helianthus annuus HanXRQChr04g0100421 Probable vacuolar protein sorting 26B HanXRQChr04 + View
Lonicera japonica Lj1C1025T2 GWHAAZE00000001 - View
Lonicera japonica Lj3A901G76 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_2_135140 Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_9_49421 Lsat_1_v8_lg_9 + View
Malus domestica MD01G1225600 vacuolar protein sorting 26A Chr01 - View
Malus domestica MD07G1296100 vacuolar protein sorting 26A Chr07 - View
Manihot esculenta Manes.01G037600 Chromosome01 - View
Punica granatum PGR142G2975 NC_045128.1 + View
Prunus persica Prupe.2G315700 K18466 - vacuolar protein sorting-associated protein 26 (VPS26) Pp02 - View
Papaver somniferum PSO135G0601 NW_020631041.1 - View
Papaver somniferum PSO384G1642 NC_039368.1 + View
Quercus lobata QL09p007595 9 + View
Rosa chinensis RcHm_v2.0_Chr1g0381991 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim09G0208000 chr09 - View
Rhododendron simsii Rhsim03G0212300 chr03 - View
Striga asiatica SGA_v2.0_scaffold18G08445 scaffold18 - View
Salvia bowleyana SalBow2G0116 GWHASIU00000007 + View
Salvia bowleyana SalBow4G1792 GWHASIU00000008 + View
Schrenkiella parvula Sp7g25670 K18466 - vacuolar protein sorting-associated protein 26 (VPS26) ch7-4 + View
Schrenkiella parvula Sp6g15670 K18466 - vacuolar protein sorting-associated protein 26 (VPS26) ch6-6 - View
Trochodendron aralioides TAR374G0153 group12 - View
Trochodendron aralioides TAR375G0151 group15 - View
Theobroma cacao Thecc.03G204900 Vacuolar protein sorting 26A Chromosome_3 - View
Tarenaya hassleriana THA.LOC104811900 vacuolar protein sorting-associated protein 26B isoform X1 NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104799953 vacuolar protein sorting-associated protein 26B-like NW_010968712.1 + View
Tripterygium wilfordii TWI39G0552 NC_052250.1 + View
Tripterygium wilfordii TWI14G0745 NC_052249.1 + View
Tripterygium wilfordii TWI23G0656 NC_052239.1 - View
Vaccinium macrocarpon vmacro10145 Similar to VPS26A: Vacuolar protein sorting-associated protein 26A (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro06417 Similar to VPS26A: Vacuolar protein sorting-associated protein 26A (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01038607001 chr16 + View