Gene: AT4G27690

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G27690
  • Transcript Identifier AT4G27690.1
  • Gene Type Coding gene
  • Location Chr4 : 13824019-13826235 : positive

Gene Family Information

  • ID HOM05D003194
  • #Genes/#Species 214/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G27690.1
  • symbol VPS26B
  • uniprot Q9T091

Descriptions

  • Description vacuolar protein sorting 26B
  • Computational description vacuolar protein sorting 26B (VPS26B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport, vacuolar transport, retrograde transport, endosome to Golgi; LOCATED IN: retromer complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 26 (InterPro:IPR005377); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting 26A (TAIR:AT5G53530.1); Has 795 Blast hits to 794 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 406; Fungi - 146; Plants - 106; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IBA
IEA
Gene Ontologyintracellular protein transport1
GO:0006886
IEA
InterProintracellular protein transport
GO:0042147
IBA
Gene Ontologyretrograde transport, endosome to Golgi1
GO:0015031
IEA
GOA Databaseprotein transport

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005622
ISS
Gene Ontologyintracellular anatomical structure
GO:0005829
IEA
GOA Databasecytosol
GO:0005829
ISS
Gene Ontologycytosol
GO:0009507
ISM
Gene Ontologychloroplast
GO:0030904
IBA
Gene Ontologyretromer complex1
GO:0005768
IEA
GOA Databaseendosome
GO:0005768
IBA
Gene Ontologyendosome1
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0010008
IEA
GOA Databaseendosome membrane
GO:0005737
IEA
GOA Databasecytoplasm
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028934 Vacuolar protein sorting protein 26 related
IPR014752 Arrestin-like, C-terminal
IPR014756 Immunoglobulin E-set
Mapman id Description
22.4.2.1.3 Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.Retromer complex.component VPS26