Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G10060 LG-11 + View
Acer truncatum Atru.chr12.1497 chr12 - View
Actinidia chinensis Actinidia17725 Lachesis_group12 - View
Actinidia chinensis Actinidia22841 Lachesis_group26 - View
Arabidopsis lyrata AL6G38380 scaffold_6 - View
Avicennia marina MSTRG.16442 ScioBoG_19743_HRSCAF_19834 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X06Q7Q PF00098//PF00271//PF04851//PF08152 - Zinc knuckle (zf-CCHC) // Helicase conserved C-terminal domain (Helicase_C) // Type III restriction enzyme, res subunit (ResIII) // GUCT (NUC152) domain (GUCT) arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.N3PAVK PF00098//PF00271//PF04851//PF08152 - Zinc knuckle (zf-CCHC) // Helicase conserved C-terminal domain (Helicase_C) // Type III restriction enzyme, res subunit (ResIII) // GUCT (NUC152) domain (GUCT) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1W5AMY K16911 - ATP-dependent RNA helicase DDX21 [EC:3.6.4.13] (DDX21) arahy.Tifrunner.gnm1.Arahy.19 + View
Arabidopsis thaliana AT5G26742 DEAD box RNA helicase (RH3) embryo defective 1138 (emb1138)%3B FUNCTIONS IN: in 6 functions%3B INVOLVED IN: embryo development ending in seed dormancy%3B LOCATED IN: chloroplast%2C chloroplast stroma%2C membrane%3B EXPRESSED IN: guard cell%2C leaf%3B CONTAINS InterPro DOMAIN/s: RNA helicase%2C DEAD-box type%2C Q motif (InterPro:IPR014014)%2C DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C GUCT (InterPro:IPR012562)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Zinc finger%2C CCHC-type (InterPro:IPR001878)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1)%3B Has 62677 Blast hits to 60420 proteins in 3357 species: Archae - 1370%3B Bacteria - 33239%3B Metazoa - 8033%3B Fungi - 5520%3B Plants - 3292%3B Viruses - 108%3B Other Eukaryotes - 11115 (source: NCBI BLink). embryo defective 1138 (emb1138)%3B FUNCTIONS IN: in 6 functions%3B INVOLVED IN: embryo development ending in seed dormancy%3B LOCATED IN: chloroplast%2C membrane%3B EXPRESSED IN: guard cell%2C leaf%3B CONTAINS InterPro DOMAIN/s: DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C GUCT (InterPro:IPR012562)%2C RNA helicase%2C DEAD-box type%2C Q motif (InterPro:IPR014014)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Zinc finger%2C CCHC-type (InterPro:IPR001878)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1)%3B Has 62370 Blast hits to 60300 proteins in 3359 species: Archae - 1368%3B Bacteria - 33087%3B Metazoa - 7991%3B Fungi - 5480%3B Plants - 3250%3B Viruses - 141%3B Other Eukaryotes - 11053 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC04g23622 ChrC04 - View
Brassica napus C09p06400 C09 + View
Brassica napus C02p59080 C02 - View
Brassica napus A06p36800 A06 - View
Beta vulgaris EL10Ac6g15326 PF00098//PF00271//PF04851//PF08152 - Zinc knuckle (zf-CCHC) // Helicase conserved C-terminal domain (Helicase_C) // Type III restriction enzyme, res subunit (ResIII) // GUCT (NUC152) domain (GUCT) Chr6_EL10_PGA_scaffold0 + View
Cicer arietinum L. Ca_10219_v3 Ca_LG4_v3 + View
Corylus avellana Haze_03984 Similar to RH16: DEAD-box ATP-dependent RNA helicase 16 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc01_g02470 DEAD-box ATP-dependent RNA helicase 37 chr1 - View
Coffea canephora Cc02_g36890 DEAD-box ATP-dependent RNA helicase 3, chloroplastic chr2 - View
Citrus clementina Ciclev10019165m.g scaffold_3 + View
Chenopodium quinoa AUR62017865 Os03g0827700: DEAD-box ATP-dependent RNA helicase 3, chloroplastic C_Quinoa_Scaffold_3086 - View
Chenopodium quinoa AUR62003551 RH3: DEAD-box ATP-dependent RNA helicase 3, chloroplastic C_Quinoa_Scaffold_2370 - View
Daucus carota DCAR_001877 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv24534 GWHABJS00000005 - View
Erigeron canadensis ECA236G1741 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.H01352 Chr08 - View
Eucalyptus grandis Eucgr.B01028 Chr02 - View
Erythranthe guttata Migut.N00993 scaffold_14 + View
Erythranthe guttata Migut.B00682 scaffold_2 + View
Fragaria x ananassa FAN05G3452 PF00098//PF00176//PF00271//PF08152 - Zinc knuckle (zf-CCHC) // SNF2 family N-terminal domain (SNF2_N) // Helicase conserved C-terminal domain (Helicase_C) // GUCT (NUC152) domain (GUCT) Fvb6-3 - View
Fragaria vesca FvH4_6g08810 PF00098//PF00176//PF00271//PF08152 - Zinc knuckle (zf-CCHC) // SNF2 family N-terminal domain (SNF2_N) // Helicase conserved C-terminal domain (Helicase_C) // GUCT (NUC152) domain (GUCT) Fvb6 + View
Glycine max Glyma.20G089600 PTHR24031:SF155 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 3, CHLOROPLASTIC Gm20 - View
Glycine max Glyma.19G223600 PTHR24031:SF155 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 3, CHLOROPLASTIC Gm19 - View
Glycine max Glyma.10G140900 K16911 - ATP-dependent RNA helicase DDX21 [EC:3.6.4.13] (DDX21) Gm10 - View
Hydrangea macrophylla Hma1.2p1_0052F.1_g030210 Hma1.2p1_0052F.1 - View
Lupinus albus Lalb_Chr21g0309931 K16911 - ATP-dependent RNA helicase DDX21 [EC:3.6.4.13] (DDX21) Lalb_Chr21 - View
Lotus japonicus Lj1g0027356 PF00098//PF00271//PF04851//PF08152 - Zinc knuckle (zf-CCHC) // Helicase conserved C-terminal domain (Helicase_C) // Type III restriction enzyme, res subunit (ResIII) // GUCT (NUC152) domain (GUCT) chr1 - View
Lonicera japonica Lj5A313T75 GWHAAZE00000005 - View
Lonicera japonica Lj9A239T57 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_9_84140 Lsat_1_v8_lg_9 - View
Magnolia biondii MBI18_g03874_MAGBIO AED:0.04 Chr18 - View
Magnolia biondii MBI18_g28941_MAGBIO AED:0.19 Chr18 - View
Malus domestica MD15G1442700 DEA(D/H)-box RNA helicase family protein Chr15 + View
Malus domestica MD04G1183400 DEAD box RNA helicase (RH3) Chr04 - View
Malus domestica MD12G1196800 DEAD box RNA helicase (RH3) Chr12 - View
Medicago truncatula Medtr8g027770 DEAD-box ATP-dependent RNA helicase family protein chr8 - View
Medicago truncatula Medtr4g134170 DEAD-box ATP-dependent RNA helicase chr4 + View
Olea europaea Oeu061914.1 chr3 + View
Petunia axillaris Peaxi162Scf00071g00129 DEAD-box ATP-dependent RNA helicase 53 Peaxi162Scf00071 - View
Punica granatum PGR083G0200 NC_045133.1 - View
Punica granatum PGR031G0768 NC_045127.1 - View
Prunus persica Prupe.6G301900 PTHR24031:SF155 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 3, CHLOROPLASTIC Pp06 - View
Phaseolus vulgaris Phvul.001G220500 PTHR24031:SF155 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 3, CHLOROPLASTIC Chr01 - View
Quercus lobata QL03p011436 3 + View
Rosa chinensis RcHm_v2.0_Chr7g0218021 RcHm_v2.0_Chr7 + View
Rosa chinensis RcHm_v2.0_Chr3g0459081 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim11G0111300 chr11 + View
Salix brachista Sabra05G0013300 GWHAAZH00000005 - View
Schrenkiella parvula Sp2g21410 K16911 - ATP-dependent RNA helicase DDX21 [EC:3.6.4.13] (DDX21) ch2-4 + View
Tarenaya hassleriana THA.LOC104823368 DEAD-box ATP-dependent RNA helicase 41 NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104818770 DEAD-box ATP-dependent RNA helicase 3%2C chloroplastic NW_010966177.1 + View
Trifolium pratense TPR.G8384 Tp57577_TGAC_v2_LG6 + View
Trifolium pratense TPR.G5948 Tp57577_TGAC_v2_LG2 + View
Vaccinium macrocarpon vmacro01647 Similar to RH3A: DEAD-box ATP-dependent RNA helicase 3A, chloroplastic (Zea mays OX%3D4577) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G3647 CM024070.1 - View
Vitis vinifera GSVIVG01031360001 chr14 - View