Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G10470 LG-8 - View
Actinidia chinensis Actinidia35846 Lachesis_group8 + View
Avicennia marina MSTRG.4240 ScioBoG_102837_HRSCAF_103074 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C718TQ KOG4676 - Splicing factor, arginine/serine-rich arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GBN5SF KOG4676 - Splicing factor, arginine/serine-rich arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT3G23900 RNA recognition motif (RRM)-containing protein RNA recognition motif (RRM)-containing protein%3B FUNCTIONS IN: nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%2C Filamin/ABP280 repeat (InterPro:IPR001298)%2C Immunoglobulin E-set (InterPro:IPR014756)%2C Filamin/ABP280 repeat-like (InterPro:IPR017868)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Immunoglobulin-like fold (InterPro:IPR013783)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT3G24255.1)%3B Has 108738 Blast hits to 50207 proteins in 2086 species: Archae - 86%3B Bacteria - 8977%3B Metazoa - 55837%3B Fungi - 11723%3B Plants - 7259%3B Viruses - 753%3B Other Eukaryotes - 24103 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0561G218 AmTr_v1.0_scaffold00013 - View
Brassica carinata BcaB06g26551 ChrB06 - View
Beta vulgaris EL10Ac3g07462 PTHR32343:SF8 - LD29830P Chr3_EL10_PGA_scaffold7 - View
Cicer arietinum L. Ca_17978_v3 Ca_LG6_v3 + View
Corylus avellana Haze_11645 Similar to CID9: Polyadenylate-binding protein-interacting protein 9 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc03_g08380 RNA recognition motif (RRM)-containing protein chr3 + View
Carpinus fangiana Cfa014955 Cfa06 + View
Cardamine hirsuta CARHR099860 RNA recognition motif (RRM)-containing protein Chr3 - View
Carya illinoinensis CiPaw.01G117700 PTHR32343//PTHR32343:SF8 - FAMILY NOT NAMED // LD29830P Chr01 - View
Citrullus lanatus ClCG05G003160 Serine/arginine-rich splicing factor 4 CG_Chr05 + View
Cucumis melo MELO3C006297.2 RNA recognition motif (RRM) containing protein chr06 + View
Carica papaya Cpa.g.sc83.41 supercontig_83 + View
Chenopodium quinoa AUR62020854 Protein of unknown function C_Quinoa_Scaffold_4257 + View
Chenopodium quinoa AUR62018565 Protein of unknown function C_Quinoa_Scaffold_4077 - View
Capsella rubella Carub.0003s2420 PTHR32343//PTHR32343:SF8 - FAMILY NOT NAMED // LD29830P scaffold_3 - View
Cucumis sativus L. CsaV3_3G010790 Tripartite motif-containing protein 45 chr3 + View
Davidia involucrata Dinv38181 GWHABJS00000016 + View
Eucalyptus grandis Eucgr.H02691 Chr08 - View
Erythranthe guttata Migut.G00755 scaffold_7 + View
Eutrema salsugineum Thhalv10002398m.g PTHR32343:SF8 - LD29830P scaffold_4 + View
Fragaria x ananassa FAN07G1190 PTHR32343:SF8 - LD29830P Fvb4-4 + View
Fragaria x ananassa FAN12G2903 PTHR32343:SF8 - LD29830P Fvb4-3 - View
Fragaria x ananassa FAN17G0194 PTHR32343:SF8 - LD29830P Fvb4-2 + View
Fragaria x ananassa FAN22G0006 PTHR32343//PTHR32343:SF8 - FAMILY NOT NAMED // LD29830P Fvb4-1 - View
Fragaria vesca FvH4_4g13380 PTHR32343:SF8 - LD29830P Fvb4 - View
Gossypium hirsutum Gohir.D02G023000 KOG2812 - Uncharacterized conserved protein D02 - View
Gossypium hirsutum Gohir.D10G137900 PTHR32343//PTHR32343:SF8 - FAMILY NOT NAMED // LD29830P D10 + View
Gossypium hirsutum Gohir.A02G019700 PTHR32343//PTHR32343:SF8 - FAMILY NOT NAMED // LD29830P A02 - View
Glycine max Glyma.05G152900 PTHR32343//PTHR32343:SF8 - FAMILY NOT NAMED // LD29830P Gm05 - View
Gossypium raimondii Gorai.005G028400 Chr05 - View
Gossypium raimondii Gorai.011G153100 Chr11 + View
Lupinus albus Lalb_Chr12g0205581 KOG4676 - Splicing factor, arginine/serine-rich Lalb_Chr12 + View
Lotus japonicus Lj4g0027601 PTHR32343//PTHR32343:SF8 - FAMILY NOT NAMED // LD29830P chr4 + View
Lactuca sativa Lsat_1_v5_gn_1_73301 PTHR32343:SF8 - LD29830P Lsat_1_v8_lg_1 - View
Magnolia biondii MBI07_g27653_MAGBIO AED:0.14 Chr07 + View
Malus domestica MD04G1016500 RNA recognition motif (RRM)-containing protein Chr04 + View
Manihot esculenta Manes.03G144900 Chromosome03 - View
Medicago truncatula Medtr8g081640 RNA recognition motif (RRM) containing protein chr8 - View
Nicotiana tabacum Nitab4.5_0000697g0080 Filamin/ABP280 repeat-like, RNA recognition motif domain, Zinc finger, CCCH-type, Filamin/ABP280 repeat, Immunoglobulin-like fold, Immunoglobulin E-set, Nucleotide-binding, alpha-beta plait Nitab4.5_0000697 + View
Olea europaea Oeu002923.1 chr11 - View
Petunia axillaris Peaxi162Scf00047g00141 F-box associated ubiquitination effector family protein Peaxi162Scf00047 - View
Prunus persica Prupe.1G163200 PTHR32343:SF8 - LD29830P Pp01 + View
Papaver somniferum PSO017G6801 NC_039362.1 + View
Populus trichocarpa Potri.001G319000 KOG2812//KOG4676 - Uncharacterized conserved protein // Splicing factor, arginine/serine-rich Chr01 + View
Populus trichocarpa Potri.017G058300 PTHR32343//PTHR32343:SF8 - FAMILY NOT NAMED // LD29830P Chr17 + View
Phaseolus vulgaris Phvul.003G050400 Chr03 + View
Quercus lobata QL06p026221 6 + View
Rosa chinensis RcHm_v2.0_Chr4g0413751 RcHm_v2.0_Chr4 - View
Salvia bowleyana SalBow8G0791 GWHASIU00000004 + View
Salix brachista Sabra17G0051900 GWHAAZH00000017 + View
Salix brachista Sabra16G0201900 GWHAAZH00000016 + View
Simmondsia chinensis Sc13g0000330 GWHAASQ00000013 + View
Sechium edule Sed0018547 LG02 - View
Sechium edule Sed0024269 LG12 + View
Solanum lycopersicum Solyc09g092250.3 Zinc finger transcription factor 55 SL4.0ch09 + View
Solanum pennellii Sopen09g035180 RNA recognition motif (RRM)-containing protein | FUNCTIONS IN: zinc ion binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type , Filamin/ABP280 repeat , Immunoglobulin-like fold , RNA recognition motif, RNP-1 , Immunoglobulin E-set , Nucleotide-binding, alpha-beta plait , Filamin/ABP280 repeat-like | BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein . Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400024356 RNA recognition motif (RRM)-containing protein ST4.03ch09 + View
Theobroma cacao Thecc.04G196200 RNA recognition motif-containing protein Chromosome_4 - View
Tarenaya hassleriana THA.LOC104808701 serine/arginine repetitive matrix protein 2 isoform X1 NW_010964923.1 - View
Trifolium pratense TPR.G11920 Tp57577_TGAC_v2_LG3 + View
Vaccinium macrocarpon vmacro00443 Protein of unknown function chr1_Vaccinium_macrocarpon_Stevens_v1 + View