Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Actinidia chinensis | Actinidia36762 | Lachesis_group9 | - | View | |
Actinidia chinensis | Actinidia08837 | Lachesis_group2 | - | View | |
Avicennia marina | MSTRG.22961 | ScioBoG_3703_HRSCAF_3719 | + | View | |
Amaranthus hybridus | Ah.15g095520 | 28 kDa ribonucleoprotein, chloroplastic (28RNP) | AmaHy_arrow1_Scaffold_15 | - | View |
Amaranthus hybridus | Ah.08g211720 | AmaHy_arrow1_Scaffold_8 | - | View | |
Amaranthus hybridus | Ah.08g218450 | AmaHy_arrow1_Scaffold_8 | - | View | |
Aquilegia oxysepala | Aqoxy5G03669 | CHR05 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.H1JF6T | K11294 - nucleolin (NCL, NSR1) | arahy.Tifrunner.gnm1.Arahy.13 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.M41V37 | K11294 - nucleolin (NCL, NSR1) | arahy.Tifrunner.gnm1.Arahy.11 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.8J87PM | K11294 - nucleolin (NCL, NSR1) | arahy.Tifrunner.gnm1.Arahy.03 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.L8UDC3 | K11294 - nucleolin (NCL, NSR1) | arahy.Tifrunner.gnm1.Arahy.01 | + | View |
Beta vulgaris | EL10Ac7g18026 | KOG0131 - Splicing factor 3b, subunit 4 | Chr7_EL10_PGA_scaffold5 | + | View |
Cannabis sativa | CANSAT80G1819 | NC_044372.1 | + | View | |
Cicer arietinum L. | Ca_16115_v3 | Ca_LG5_v3 | - | View | |
Corylus avellana | Haze_07626 | Similar to CP31A: 31 kDa ribonucleoprotein, chloroplastic (Arabidopsis thaliana OX%3D3702) | 4 | + | View |
Coffea canephora | Cc04_g10930 | 28 kDa ribonucleoprotein, chloroplastic | chr4 | - | View |
Ceratophyllum demersum | CDE09G1205 | 7 | + | View | |
Carya illinoinensis | CiPaw.04G030600 | KOG0131 - Splicing factor 3b, subunit 4 | Chr04 | + | View |
Carya illinoinensis | CiPaw.12G033100 | KOG0131 - Splicing factor 3b, subunit 4 | Chr12 | + | View |
Carya illinoinensis | CiPaw.03G047100 | KOG0131 - Splicing factor 3b, subunit 4 | Chr03 | + | View |
Carya illinoinensis | CiPaw.11G015100 | KOG0131 - Splicing factor 3b, subunit 4 | Chr11 | - | View |
Citrullus lanatus | ClCG06G017510 | RNA-binding protein | CG_Chr06 | + | View |
Cucumis melo | MELO3C026246.2 | 31 kDa ribonucleoprotein, chloroplastic | chr02 | + | View |
Carica papaya | Cpa.g.sc4.13 | supercontig_4 | - | View | |
Chenopodium quinoa | AUR62001230 | 28 kDa ribonucleoprotein, chloroplastic | C_Quinoa_Scaffold_2716 | + | View |
Capsella rubella | Carub.0008s1025 | KOG0131 - Splicing factor 3b, subunit 4 | scaffold_8 | - | View |
Cucumis sativus L. | CsaV3_1G000940 | Ribonucleoprotein | chr1 | - | View |
Davidia involucrata | Dinv33414 | GWHABJS00000014 | - | View | |
Davidia involucrata | Dinv11129 | GWHABJS00000006 | + | View | |
Durio zibethinus | Duzib205G1532 | NW_019168381.1 | + | View | |
Durio zibethinus | Duzib084G0894 | NW_019167827.1 | + | View | |
Durio zibethinus | Duzib068G0433 | NW_019167838.1 | + | View | |
Erigeron canadensis | ECA246G2849 | Conyza_canadensis_scaffold:8 | + | View | |
Erigeron canadensis | ECA232G3221 | Conyza_canadensis_scaffold:2 | + | View | |
Eucalyptus grandis | Eucgr.B00177 | Chr02 | - | View | |
Eucalyptus grandis | Eucgr.K02778 | Chr11 | - | View | |
Erythranthe guttata | Migut.O00192 | scaffold_17 | + | View | |
Fragaria x ananassa | FAN08G0414 | KOG0131 - Splicing factor 3b, subunit 4 | Fvb5-3 | - | View |
Fragaria x ananassa | FAN18G2801 | KOG0131 - Splicing factor 3b, subunit 4 | Fvb5-1 | + | View |
Fragaria x ananassa | FAN13G2846 | KOG0131 - Splicing factor 3b, subunit 4 | Fvb5-2 | + | View |
Fragaria x ananassa | FAN05G0987 | K11294 - nucleolin (NCL, NSR1) | Fvb6-3 | - | View |
Fragaria x ananassa | FAN04G1028 | KOG0131 - Splicing factor 3b, subunit 4 | Fvb5-4 | + | View |
Fragaria vesca | FvH4_5g06660 | KOG0131 - Splicing factor 3b, subunit 4 | Fvb5 | + | View |
Gossypium hirsutum | Gohir.D07G059600 | K11294 - nucleolin (NCL, NSR1) | D07 | - | View |
Gossypium hirsutum | Gohir.A07G055300 | K11294 - nucleolin (NCL, NSR1) | A07 | - | View |
Gossypium hirsutum | Gohir.D03G102200 | K11294 - nucleolin (NCL, NSR1) | D03 | + | View |
Glycine max | Glyma.06G175400 | K11294 - nucleolin (NCL, NSR1) | Gm06 | - | View |
Glycine max | Glyma.17G125700 | K11294 - nucleolin (NCL, NSR1) | Gm17 | + | View |
Glycine max | Glyma.05G043200 | K11294 - nucleolin (NCL, NSR1) | Gm05 | + | View |
Glycine max | Glyma.04G190100 | K11294 - nucleolin (NCL, NSR1) | Gm04 | + | View |
Gossypium raimondii | Gorai.003G107700 | Chr03 | + | View | |
Gossypium raimondii | Gorai.001G063100 | Chr01 | - | View | |
Hydrangea macrophylla | Hma1.2p1_0046F.1_g027340 | Hma1.2p1_0046F.1 | + | View | |
Lupinus albus | Lalb_Chr07g0183131 | K11294 - nucleolin (NCL, NSR1) | Lalb_Chr07 | + | View |
Lupinus albus | Lalb_Chr23g0273421 | K11294 - nucleolin (NCL, NSR1) | Lalb_Chr23 | + | View |
Lupinus albus | Lalb_Chr12g0201971 | K11294 - nucleolin (NCL, NSR1) | Lalb_Chr12 | + | View |
Lotus japonicus | Lj4g0004340 | K11294 - nucleolin (NCL, NSR1) | chr4 | + | View |
Lotus japonicus | Lj1g0026820 | K11294 - nucleolin (NCL, NSR1) | chr1 | - | View |
Lonicera japonica | Lj5A133T93 | GWHAAZE00000005 | + | View | |
Lonicera japonica | Lj5C102T10 | GWHAAZE00000005 | + | View | |
Lonicera japonica | Lj9A471G29 | GWHAAZE00000009 | - | View | |
Lonicera japonica | Lj9A440T64 | GWHAAZE00000009 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_5_13821 | Lsat_1_v8_lg_5 | + | View | |
Malus domestica | MD06G1162000 | chloroplast RNA-binding protein 31B | Chr06 | - | View |
Malus domestica | MD14G1167800 | chloroplast RNA-binding protein 31B | Chr14 | - | View |
Manihot esculenta | Manes.06G112000 | Chromosome06 | + | View | |
Manihot esculenta | Manes.14G057600 | Chromosome14 | - | View | |
Medicago truncatula | Medtr3g075500 | 31 kDa ribonucleoprotein | chr3 | - | View |
Medicago truncatula | Medtr4g104450 | RNA recognition motif, a.k.a. RRM, RBD protein | chr4 | - | View |
Nelumbo nucifera | Nn4g22540 | chr4 | - | View | |
Nicotiana tabacum | Nitab4.5_0003542g0060 | RNA recognition motif domain, Nucleotide-binding, alpha-beta plait | Nitab4.5_0003542 | - | View |
Nicotiana tabacum | Nitab4.5_0000510g0160 | Nucleotide-binding, alpha-beta plait, RNA recognition motif domain | Nitab4.5_0000510 | - | View |
Olea europaea | Oeu045494.1 | chr1 | - | View | |
Olea europaea | Oeu023463.1 | chr12 | + | View | |
Petunia axillaris | Peaxi162Scf00089g01127 | 31-kDa RNA binding protein | Peaxi162Scf00089 | - | View |
Punica granatum | PGR083G2362 | NC_045133.1 | - | View | |
Punica granatum | PGR142G1042 | NC_045128.1 | + | View | |
Punica granatum | PGR044G0612 | NC_045134.1 | + | View | |
Prunus persica | Prupe.5G162300 | KOG0131 - Splicing factor 3b, subunit 4 | Pp05 | - | View |
Pisum sativum | Psat5g118000 | RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) | chr5LG3 | + | View |
Papaver somniferum | PSO063G3597 | NC_039364.1 | - | View | |
Populus trichocarpa | Potri.015G086500 | KOG0131 - Splicing factor 3b, subunit 4 | Chr15 | + | View |
Populus trichocarpa | Potri.012G090200 | K11294 - nucleolin (NCL, NSR1) | Chr12 | + | View |
Phaseolus vulgaris | Phvul.009G171500 | K11294 - nucleolin (NCL, NSR1) | Chr09 | - | View |
Phaseolus vulgaris | Phvul.003G206700 | K11294 - nucleolin (NCL, NSR1) | Chr03 | + | View |
Quercus lobata | QL02p073743 | CM012294 | - | View | |
Quercus lobata | QL10p005992 | 10 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr7g0192001 | RcHm_v2.0_Chr7 | - | View | |
Rhododendron simsii | Rhsim12G0168800 | chr12 | + | View | |
Salix brachista | Sabra12G0065000 | GWHAAZH00000012 | + | View | |
Salix brachista | Sabra15G0109300 | GWHAAZH00000015 | + | View | |
Simmondsia chinensis | Sc04g0001190 | GWHAASQ00000004 | - | View | |
Sechium edule | Sed0023054 | LG08 | - | View | |
Solanum lycopersicum | Solyc03g111840.3 | RNA-binding protein (AHRD V3.3 *** Q40270_MESCR) | SL4.0ch03 | - | View |
Solanum pennellii | Sopen03g030940 | 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco), Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs. | 31-kDa RNA binding protein (RBP31) | FUNCTIONS IN: RNA binding, poly(U) RNA binding | INVOLVED IN: RNA modification, RNA processing, innate immune response | LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 31B | Spenn-ch03 | - | View |
Solanum tuberosum | PGSC0003DMG400015155 | 28 kDa ribonucleoprotein, chloroplastic | ST4.03ch03 | - | View |
Selenicereus undatus | Hund05608 | Scaffold_19641 | + | View | |
Trochodendron aralioides | TAR629G0580 | group0 | - | View | |
Trochodendron aralioides | TAR371G0725 | group13 | + | View | |
Trochodendron aralioides | TAR374G0833 | group12 | + | View | |
Theobroma cacao | Thecc.03G118100 | 31-kDa RNA binding protein | Chromosome_3 | + | View |
Tarenaya hassleriana | THA.LOC104824998 | RNA-binding protein CP31B%2C chloroplastic | NW_010966986.1 | - | View |
Trifolium pratense | TPR.G37529 | Tp57577_TGAC_v2_LG5 | - | View | |
Tripterygium wilfordii | TWI23G0264 | NC_052239.1 | - | View | |
Tripterygium wilfordii | TWI14G0881 | NC_052249.1 | + | View | |
Vaccinium macrocarpon | vmacro16684 | Similar to 28 kDa ribonucleoprotein, chloroplastic (Nicotiana sylvestris OX%3D4096) | chr4_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo1309G2545 | CM024072.1 | + | View | |
Vigna mungo | VMungo1215G0101 | CM024074.1 | - | View | |
Vitis vinifera | GSVIVG01007596001 | chr17 | + | View | |
Vitis vinifera | GSVIVG01032361001 | chr14 | + | View |