Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0049132 PREDICTED: uncharacterized protein LOC100248637 [Vitis vinifera] Chr7 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G2180 LG-8 - View
Acer truncatum Atru.chr2.2204 chr2 - View
Actinidia chinensis Actinidia35218 Lachesis_group2 - View
Actinidia chinensis Actinidia12564 Lachesis_group19 + View
Arabidopsis lyrata AL3G27310 scaffold_3 - View
Amaranthus hybridus Ah.06g185100 AmaHy_arrow1_Scaffold_6 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JLX6YP PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) arahy.Tifrunner.gnm1.Arahy.18 + View
Arabidopsis thaliana AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein IDM1 is a histone H3 acetyltransferase that is capable of recognizing methylated DNA through its MBD domain and recognizing unmethylated histone H3K4 through its PHD domain. It negatively regulates DNA demethylation%2C preventing DNA hypermethylation of highly homologous multicopy genes and other repetitive sequences. Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein%3B FUNCTIONS IN: DNA binding%2C zinc ion binding%2C N-acetyltransferase activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%2C metabolic process%3B LOCATED IN: nucleus%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase (InterPro:IPR000182)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Acyl-CoA N-acyltransferase (InterPro:IPR016181)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%3B BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT1G05380.2)%3B Has 4644 Blast hits to 3909 proteins in 217 species: Archae - 1%3B Bacteria - 6%3B Metazoa - 3256%3B Fungi - 362%3B Plants - 697%3B Viruses - 0%3B Other Eukaryotes - 322 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB06g29525 ChrB06 - View
Brassica napus C05p52210 C05 + View
Brassica napus A05p34470 A05 + View
Brassica oleracea BolC5t33907H C5 + View
Brassica rapa BraA05t22266Z A05 + View
Capsicum annuum CAN.G162.14 PGAv.1.6.scaffold162 - View
Cicer arietinum L. Ca_03999_v3 Ca_LG1_v3 - View
Corylus avellana Haze_09342 Similar to IDM1: Increased DNA methylation 1 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc05_g11270 Putative Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein chr5 - View
Citrus clementina Ciclev10018500m.g scaffold_3 - View
Carpinus fangiana Cfa019583 Cfa08 - View
Cardamine hirsuta CARHR089920 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein Chr3 - View
Carya illinoinensis CiPaw.11G161800 2.3.1.48 - Histone acetyltransferase Chr11 - View
Citrullus lanatus ClCG11G017540 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein LENGTH=1189 CG_Chr11 - View
Cucumis melo MELO3C025632.2 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein, putative isoform 1 chr07 - View
Corchorus olitorius COL.COLO4_17591 Zinc finger%2C PHD-type AWUE01016365.1 - View
Carica papaya Cpa.g.sc97.95 supercontig_97 + View
Capsella rubella Carub.0003s1464 PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) scaffold_3 - View
Cucumis sativus L. CsaV3_4G033210 increased DNA methylation 1 isoform X1 chr4 - View
Daucus carota DCAR_021018 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_019593 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv18351 GWHABJS00000013 + View
Davidia involucrata Dinv14976 GWHABJS00000001 - View
Durio zibethinus Duzib213G0779 NW_019167993.1 + View
Erigeron canadensis ECA236G5053 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA240G0457 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.F01223 Chr06 + View
Erythranthe guttata Migut.H01986 scaffold_8 + View
Eutrema salsugineum Thhalv10019928m.g scaffold_13 + View
Fragaria x ananassa FAN16G3372 PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) Fvb3-3 - View
Fragaria x ananassa FAN11G1632 PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) Fvb3-4 + View
Fragaria x ananassa FAN21G1728 PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) Fvb3-2 + View
Fragaria x ananassa FAN25G3735 2.3.1.48 - Histone acetyltransferase Fvb3-1 + View
Fragaria vesca FvH4_3g18560 PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) Fvb3 - View
Gossypium hirsutum Gohir.A13G148700 PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) A13 + View
Gossypium hirsutum Gohir.D11G305900 2.3.1.48 - Histone acetyltransferase D11 + View
Gossypium hirsutum Gohir.A11G287200 2.3.1.48 - Histone acetyltransferase A11 - View
Gossypium hirsutum Gohir.D13G153200 PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) D13 + View
Glycine max Glyma.13G271100 PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) Gm13 - View
Glycine max Glyma.12G228700 PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) Gm12 + View
Gossypium raimondii Gorai.013G173100 Chr13 + View
Helianthus annuus HanXRQChr10g0304861 Probable acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein HanXRQChr10 + View
Lupinus albus Lalb_Chr01g0016641 PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) Lalb_Chr01 - View
Lupinus albus Lalb_Chr25g0285951 Lalb_Chr25 - View
Lupinus albus Lalb_Chr20g0109351 PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) Lalb_Chr20 - View
Lotus japonicus Lj3g0018614 PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) chr3 + View
Lonicera japonica Lj1C832G6 GWHAAZE00000001 - View
Lonicera japonica Lj8C150G3 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_9_99421 Lsat_1_v8_lg_9 + View
Lactuca sativa Lsat_1_v5_gn_5_127360 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_7_103320 2.3.1.48 - Histone acetyltransferase Lsat_1_v8_lg_7 - View
Malus domestica MD03G1241200 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein Chr03 + View
Malus domestica MD11G1260600 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein Chr11 + View
Manihot esculenta Manes.15G092800 Chromosome15 + View
Nicotiana tabacum Nitab4.5_0000246g0180 Acyl-CoA N-acyltransferase, Zinc finger, RING/FYVE/PHD-type, Zinc finger, PHD-type, conserved site, Zinc finger, PHD-type, Zinc finger, PHD-finger, Zinc finger, FYVE/PHD-type Nitab4.5_0000246 + View
Olea europaea Oeu051127.1 chr6 - View
Olea europaea Oeu061352.1 chr21 + View
Petunia axillaris Peaxi162Scf00069g02134 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein Peaxi162Scf00069 + View
Punica granatum PGR083G1849 NC_045133.1 + View
Prunus persica Prupe.4G167700 Pp04 - View
Populus trichocarpa Potri.001G392801 2.3.1.48 - Histone acetyltransferase Chr01 - View
Phaseolus vulgaris Phvul.005G067300 PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) Chr05 - View
Quercus lobata QL08p026654 8 - View
Rosa chinensis RcHm_v2.0_Chr5g0031311 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim06G0206400 chr06 + View
Rhododendron simsii Rhsim04G0024800 chr04 + View
Salvia bowleyana SalBow7G4451 GWHASIU00000005 + View
Salix brachista Sabra16G0257700 GWHAAZH00000016 - View
Simmondsia chinensis Sc16g0007490 GWHAASQ00000016 + View
Sechium edule Sed0008083 LG04 - View
Solanum lycopersicum Solyc07g062600.4 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (AHRD V3.3 *-* A0A1I9LNP0_ARATH) SL4.0ch07 - View
Schrenkiella parvula Sp3g13180 PF00628//PF16135 - PHD-finger (PHD) // TPL-binding domain in jasmonate signalling (Jas) ch3-1 - View
Solanum pennellii Sopen07g030830 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein | FUNCTIONS IN: DNA binding, zinc ion binding, N-acetyltransferase activity | INVOLVED IN: regulation of transcription, DNA-dependent, metabolic process | LOCATED IN: nucleus | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase , Zinc finger, PHD-type , Zinc finger, FYVE/PHD-type , Acyl-CoA N-acyltransferase , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400012431 DNA binding protein ST4.03ch07 - View
Trochodendron aralioides TAR626G0976 group3 - View
Theobroma cacao Thecc.07G107600 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein Chromosome_7 + View
Tarenaya hassleriana THA.LOC104810441 increased DNA methylation 1 isoform X1 NW_010965216.1 - View
Tripterygium wilfordii TWI38G1493 NC_052252.1 + View
Tripterygium wilfordii TWI38G2315 NC_052252.1 + View
Tripterygium wilfordii TWI39G0714 NC_052250.1 - View
Vaccinium macrocarpon vmacro09499 Similar to IDM1: Increased DNA methylation 1 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro11921 Similar to IDM1: Increased DNA methylation 1 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G1639 CM024079.1 + View
Vitis vinifera GSVIVG01014219001 chr19 - View