Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G14600 LG-7 + View
Acer truncatum Atru.chr4.324 chr4 - View
Actinidia chinensis Actinidia20421 Lachesis_group25 - View
Actinidia chinensis Actinidia28884 Lachesis_group8 - View
Arabidopsis lyrata AL4G11410 scaffold_4 - View
Avicennia marina MSTRG.15739 ScioBoG_19538_HRSCAF_19626 + View
Aquilegia oxysepala Aqoxy6G00514 CHR06 + View
Arabidopsis thaliana AT2G22090 RNA-binding (RRM/RBD/RNP motifs) family protein encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. As with UBP1%2C transient overexpression of UBA1a in protoplasts increases the steady-state levels of reporter mRNAs in a promoter-dependent manner. Along with UBP1 and UBA2a%2C it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus. UBA1A%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT2G19380.1)%3B Has 13884 Blast hits to 11620 proteins in 712 species: Archae - 0%3B Bacteria - 872%3B Metazoa - 7516%3B Fungi - 1398%3B Plants - 2946%3B Viruses - 0%3B Other Eukaryotes - 1152 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR0564G226 AmTr_v1.0_scaffold00010 + View
Brassica napus C08p41010 C08 + View
Brassica napus A04p16610 A04 - View
Brassica rapa BraA04t17295Z A04 - View
Cannabis sativa CANSAT01G2323 NC_044373.1 + View
Corylus avellana Haze_25009 Similar to UBA2B: UBP1-associated protein 2B (Arabidopsis thaliana OX%3D3702) 8 + View
Coffea canephora Cc07_g15760 Putative RNA-binding (RRM/RBD/RNP motifs) family protein chr7 + View
Citrus clementina Ciclev10025608m.g scaffold_7 - View
Ceratophyllum demersum CDE02G1385 1 + View
Cardamine hirsuta CARHR113220 RNA-binding protein Chr4 - View
Carya illinoinensis CiPaw.03G137100 PTHR24012//PTHR24012:SF397 - FAMILY NOT NAMED // OLIGOURIDYLATE-BINDING PROTEIN 1A-RELATED Chr03 - View
Citrullus lanatus ClCG07G009360 RNA-binding protein CG_Chr07 - View
Cucumis melo MELO3C017573.2 UBP1-associated protein 2B-like chr07 - View
Capsella rubella Carub.0004s0123 PTHR24012:SF391 - UBP1-ASSOCIATED PROTEINS 1B-RELATED scaffold_4 - View
Cucumis sativus L. CsaV3_UNG186420 UBP1-associated protein 2B-like scaffold78 - View
Cucumis sativus L. CsaV3_4G004880 UBP1-associated protein 2B-like chr4 + View
Daucus carota DCAR_001005 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv19515 GWHABJS00000014 + View
Durio zibethinus Duzib147G1588 NW_019168470.1 - View
Durio zibethinus Duzib264G0024 NW_019167960.1 - View
Durio zibethinus Duzib128G1022 NW_019168481.1 - View
Eutrema salsugineum Thhalv10000207m.g PTHR24012:SF397 - OLIGOURIDYLATE-BINDING PROTEIN 1A-RELATED scaffold_15 - View
Fragaria x ananassa FAN23G2997 KOG0148//KOG4205 - Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 Fvb1-3 + View
Fragaria x ananassa FAN19G0445 KOG0148//KOG4205 - Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 Fvb1-4 + View
Fragaria x ananassa FAN28G0196 KOG0148//KOG4205 - Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 Fvb1-1 - View
Fragaria vesca FvH4_1g21870 KOG0148//KOG4205 - Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 Fvb1 + View
Lonicera japonica Lj2A559T12 GWHAAZE00000002 + View
Malus domestica MD15G1332000 RNA-binding (RRM/RBD/RNP motifs) family protein Chr15 - View
Malus domestica MD01G1020300 RNA-binding (RRM/RBD/RNP motifs) family protein Chr01 + View
Nelumbo nucifera Nn5g28959 chr5 + View
Olea europaea Oeu028388.1 chr18 - View
Olea europaea Oeu002121.1 scaffold1069 - View
Oryza sativa ssp. japonica Os04g0636900 RNA-binding region RNP-1 (RNA recognition motif) domain containing protein. chr04 - View
Punica granatum PGR004G2756 NC_045131.1 - View
Prunus persica Prupe.6G177300 PTHR24012:SF397 - OLIGOURIDYLATE-BINDING PROTEIN 1A-RELATED Pp06 - View
Papaver somniferum PSO541G0832 NC_039363.1 - View
Populus trichocarpa Potri.005G081600 KOG0130//KOG0131 - RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Splicing factor 3b, subunit 4 Chr05 + View
Quercus lobata QL06p033219 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0115871 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim10G0154800 chr10 - View
Striga asiatica SGA_v2.0_scaffold47G17734 scaffold47 - View
Salix brachista Sabra05G0066900 GWHAAZH00000005 + View
Salix brachista Sabra04G0036100 GWHAAZH00000004 - View
Sechium edule Sed0012476 LG13 + View
Schrenkiella parvula Sp4g01120 PTHR24012:SF391 - UBP1-ASSOCIATED PROTEINS 1B-RELATED ch4-1 - View
Trochodendron aralioides TAR625G1119 group4 - View
Trochodendron aralioides TAR628G0784 group5 + View
Theobroma cacao Thecc.01G109400 RNA-binding (RRM/RBD/RNP motifs) family protein Chromosome_1 + View
Vanilla planifolia HPP92_027141 RNA binding protein *** JADCNL010000147.1 + View
Vanilla planifolia HPP92_016470 RNA binding protein *** CM028157.1 - View
Vitis vinifera GSVIVG01022197001 chr7 + View