Gene: AT2G22090
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G22090
- Transcript Identifier AT2G22090.1
- Gene Type Coding gene
- Location Chr2 : 9388571-9390450 : negative
Gene Family Information
- ID HOM05D000845
- #Genes/#Species 706/97
- Phylogenetic origin
- ID ORTHO05D011679
- #Genes/#Species 29/14
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT2G22090.1
- symbol UBA1A
- uniprot Q9SHZ6
Descriptions
- Description RNA-binding (RRM/RBD/RNP motifs) family protein
- Computational description UBA1A; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT2G19380.1); Has 13884 Blast hits to 11620 proteins in 712 species: Archae - 0; Bacteria - 872; Metazoa - 7516; Fungi - 1398; Plants - 2946; Viruses - 0; Other Eukaryotes - 1152 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048255 | NAS | Gene Ontology | mRNA stabilization | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
| GO:0035925 | IDA | Gene Ontology | mRNA 3'-UTR AU-rich region binding | 1 |
| GO:0042802 | IPI | Gene Ontology | identical protein binding | 1 |
| GO:0003729 | IDA, HDA | Gene Ontology | mRNA binding | 2 3 |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 1 4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |