Gene: Potri.005G081600

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.005G081600
  • Transcript Identifier Potri.005G081600.2
  • Gene Type Coding gene
  • Location Chr05 : 5557121-5559910 : positive

Gene Family Information

  • ID HOM05D000845
  • #Genes/#Species 706/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.005G081600.v4.1
  • pacid 42805457
  • synonym eugene3.00050207

Descriptions

  • Description KOG0130//KOG0131 - RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Splicing factor 3b, subunit 4
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT2G22090
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G22090
GO:0035925
ISO
PLAZA Integrative OrthologymRNA 3'-UTR AU-rich region binding AT2G22090
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G22090

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G22090

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.1 not assigned.annotated