Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BcaB01g01012 ChrB01 + View
BcaC01g01912 ChrC01 + View
BcaC09g49749 ChrC09 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G15510 LG-4 - View
Actinidia chinensis Actinidia33864 Lachesis_group15 + View
Actinidia chinensis Actinidia23950 Lachesis_group9 - View
Arabidopsis lyrata AL5G25380 scaffold_5 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P99R0P PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H1DAXK PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED arahy.Tifrunner.gnm1.Arahy.18 + View
Arabidopsis thaliana AT3G46510 plant U-box 13 Encodes a protein containing a UND%2C a U-box%2C and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK%2C ARK1%2C and ARK2 but not by SD1-29. Involved in ubiquitination of pattern recognition receptor FLS2. plant U-box 13 (PUB13)%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo (InterPro:IPR000225)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1)%3B Has 8308 Blast hits to 5676 proteins in 314 species: Archae - 6%3B Bacteria - 52%3B Metazoa - 2498%3B Fungi - 809%3B Plants - 4013%3B Viruses - 3%3B Other Eukaryotes - 927 (source: NCBI BLink). Chr3 - View
Brassica napus A06p20920 A06 + View
Brassica napus C01p33340 C01 + View
Brassica napus C03p70680 C03 - View
Brassica rapa BraA06t25173Z A06 + View
Brassica rapa BraA01t02552Z A01 + View
Capsicum annuum CAN.G394.51 PGAv.1.6.scaffold394 - View
Corylus avellana Haze_24079 Similar to PUB13: U-box domain-containing protein 13 (Arabidopsis thaliana OX%3D3702) 6 - View
Citrus clementina Ciclev10027966m.g scaffold_8 - View
Cardamine hirsuta CARHR155290 U-box domain-containing protein 13 Chr5 + View
Carya illinoinensis CiPaw.13G095700 PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Chr13 + View
Carica papaya Cpa.g.sc81.166 supercontig_81 + View
Capsella rubella Carub.0005s1278 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED scaffold_5 - View
Cucumis sativus L. CsaV3_1G034080 RING-type E3 ubiquitin transferase chr1 - View
Durio zibethinus Duzib170G0865 NW_019167871.1 + View
Durio zibethinus Duzib150G1180 NW_019167882.1 - View
Gossypium hirsutum Gohir.D07G101600 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED D07 - View
Gossypium hirsutum Gohir.D05G096500 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED D05 + View
Gossypium hirsutum Gohir.A07G097101 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED A07 - View
Glycine max Glyma.12G063700 PTHR23315//PTHR23315:SF69 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Gm12 + View
Gossypium raimondii Gorai.001G109500 Chr01 - View
Gossypium raimondii Gorai.009G100000 Chr09 + View
Punica granatum PGR102G0436 NC_045129.1 - View
Salix brachista Sabra09G0020600 GWHAAZH00000009 - View
Sechium edule Sed0006027 LG13 - View
Schrenkiella parvula Sp5g15170 PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED ch5-1 + View
Theobroma cacao Thecc.09G323400 Plant U-box 13 Chromosome_9 + View
Tarenaya hassleriana THA.LOC104810786 U-box domain-containing protein 13 NW_010965304.1 + View
Vaccinium macrocarpon vmacro14524 Similar to PUB13: U-box domain-containing protein 13 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1127G2015 CM024076.1 + View