Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ah.02g113610 AmaHy_arrow1_Scaffold_2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G11210 LG-4 + View
Aethionema arabicum Aa31LG7G8330 LG-7 + View
Actinidia chinensis Actinidia04884 Lachesis_group1 + View
Actinidia chinensis Actinidia38770 Lachesis_group4 + View
Actinidia chinensis Actinidia19037 Lachesis_group9 + View
Actinidia chinensis Actinidia35003 Lachesis_group2 + View
Actinidia chinensis Actinidia37623 Lachesis_group13 - View
Arabidopsis lyrata AL2G28710 scaffold_2 - View
Avicennia marina MSTRG.9626 ScioBoG_12795_HRSCAF_12848 - View
Avicennia marina MSTRG.4433 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.23014 ScioBoG_3703_HRSCAF_3719 - View
Avicennia marina MSTRG.708 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.23929 ScioBoG_3895_HRSCAF_3912 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.52XQ2N PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.B68HGA PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WX7AU9 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.02S8F1 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MQC2P6 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT1G69570 Dof-type zinc finger DNA-binding family protein Dof-type zinc finger DNA-binding family protein%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G26790.1)%3B Has 1305 Blast hits to 1151 proteins in 75 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 16%3B Fungi - 10%3B Plants - 1107%3B Viruses - 0%3B Other Eukaryotes - 166 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT5G39660 cycling DOF factor 2 Dof-type zinc finger domain-containing protein%2C identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1%2C but its overexpression does not change flowering time under short or long day conditions. cycling DOF factor 2 (CDF2)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1)%3B Has 1150 Blast hits to 1134 proteins in 76 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 18%3B Fungi - 6%3B Plants - 1095%3B Viruses - 0%3B Other Eukaryotes - 25 (source: NCBI BLink). cycling DOF factor 2 (CDF2)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT1G26790 Dof-type zinc finger DNA-binding family protein Dof-type zinc finger DNA-binding family protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: stem%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G69570.1)%3B Has 1165 Blast hits to 1142 proteins in 80 species: Archae - 0%3B Bacteria - 20%3B Metazoa - 7%3B Fungi - 8%3B Plants - 1093%3B Viruses - 0%3B Other Eukaryotes - 37 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0564G304 AmTr_v1.0_scaffold00010 + View
Brassica carinata BcaC01g01811 ChrC01 + View
Brassica carinata BcaC05g26384 ChrC05 + View
Brassica carinata BcaB03g14726 ChrB03 - View
Brassica napus A09p40220 A09 - View
Brassica napus A07p35930 A07 - View
Brassica napus A06p20140 A06 + View
Brassica napus C03p71670 C03 - View
Brassica oleracea BolC5t31149H C5 + View
Brassica oleracea BolC6t39405H C6 - View
Brassica rapa BraA06t25099Z A06 + View
Brassica rapa BraA07t31176Z A07 - View
Brassica rapa BraA09t39520Z A09 - View
Beta vulgaris EL10Ac5g11029 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr5_EL10_PGA_scaffold2 + View
Camellia sinensis var. sinensis CSS0034004 unnamed protein product [Coffea canephora] Chr15 - View
Camellia sinensis var. sinensis CSS0006959 unnamed protein product [Coffea canephora] Chr2 - View
Camellia sinensis var. sinensis CSS0017752 PREDICTED: cyclic dof factor 2 [Vitis vinifera] Chr12 - View
Cicer arietinum L. Ca_21816_v3 Ca_LG7_v3 - View
Corylus avellana Haze_14515 Similar to CDF2: Cyclic dof factor 2 (Arabidopsis thaliana OX%3D3702) 5 - View
Corylus avellana Haze_07317 Similar to CDF3: Cyclic dof factor 3 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc04_g16510 Putative Dof zinc finger protein DOF3.3 chr4 - View
Coffea canephora Cc07_g03470 Putative Dof zinc finger protein DOF5.2 chr7 + View
Coffea canephora Cc11_g12870 Putative Dof zinc finger protein DOF5.2 chr11 - View
Citrus clementina Ciclev10019949m.g scaffold_3 + View
Carpinus fangiana Cfa018933 Cfa08 - View
Carpinus fangiana Cfa007571 Cfa03 + View
Cardamine hirsuta CARHR156140 Dof zinc finger protein Chr5 - View
Cardamine hirsuta CARHR025150 Dof zinc finger protein Chr1 + View
Cardamine hirsuta CARHR062520 Dof zinc finger protein Chr2 - View
Carya illinoinensis CiPaw.05G133500 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Chr05 - View
Carya illinoinensis CiPaw.11G045500 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr11 + View
Carya illinoinensis CiPaw.04G016400 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr04 - View
Carya illinoinensis CiPaw.06G086300 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr06 + View
Citrullus lanatus ClCG04G012210 Dof zinc finger protein CG_Chr04 - View
Citrullus lanatus ClCG06G016160 Dof zinc finger protein CG_Chr06 - View
Citrullus lanatus ClCG05G024190 Dof zinc finger protein CG_Chr05 - View
Cucumis melo MELO3C017178.2 cyclic dof factor 3 chr02 - View
Cucumis melo MELO3C001987.2 cyclic dof factor 3 chr12 - View
Carica papaya Cpa.g.sc111.11 supercontig_111 + View
Chenopodium quinoa AUR62008425 CDF3: Cyclic dof factor 3 C_Quinoa_Scaffold_3422 + View
Chenopodium quinoa AUR62021670 CDF3: Cyclic dof factor 3 C_Quinoa_Scaffold_1675 - View
Capsella rubella Carub.0002s1624 PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED scaffold_2 - View
Capsella rubella Carub.0001s2422 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED scaffold_1 + View
Capsella rubella Carub.0005s1359 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED scaffold_5 - View
Cucumis sativus L. CsaV3_1G002390 cyclic dof factor 3 chr1 + View
Cucumis sativus L. CsaV3_1G005540 cyclic dof factor 3 chr1 + View
Daucus carota DCAR_026058 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_031013 hypothetical protein DCARv2_Chr9 - View
Daucus carota DCAR_007160 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv10640 GWHABJS00000006 - View
Davidia involucrata Dinv38720 GWHABJS00000019 - View
Davidia involucrata Dinv33771 GWHABJS00000014 + View
Davidia involucrata Dinv16658 GWHABJS00000018 + View
Durio zibethinus Duzib251G0890 NW_019167971.1 - View
Durio zibethinus Duzib068G0179 NW_019167838.1 + View
Durio zibethinus Duzib147G1585 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NW_019168470.1 - View
Durio zibethinus Duzib205G1231 NW_019168381.1 + View
Durio zibethinus Duzib264G0349 NW_019167960.1 + View
Erigeron canadensis ECA247G0309 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA238G0136 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA246G3081 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA232G3791 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.B00515 Chr02 + View
Eucalyptus grandis Eucgr.G02493 Chr07 - View
Eucalyptus grandis Eucgr.K02480 Chr11 + View
Erythranthe guttata Migut.D01811 scaffold_4 - View
Erythranthe guttata Migut.L01278 scaffold_12 - View
Eutrema salsugineum Thhalv10007936m.g PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED scaffold_5 - View
Eutrema salsugineum Thhalv10018679m.g PTHR31089:SF1 - CYCLIC DOF FACTOR 4-RELATED scaffold_9 + View
Fragaria x ananassa FAN08G0828 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb5-3 + View
Fragaria x ananassa FAN18G2770 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb5-1 - View
Fragaria x ananassa FAN07G0856 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb4-4 + View
Fragaria x ananassa FAN13G2004 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Fvb5-2 - View
Fragaria x ananassa FAN17G2154 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb4-2 + View
Fragaria vesca FvH4_5g14830 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Fvb5 - View
Gossypium hirsutum Gohir.A12G164400 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED A12 - View
Gossypium hirsutum Gohir.A12G178100 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED A12 + View
Gossypium hirsutum Gohir.D12G180500 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED D12 + View
Gossypium hirsutum Gohir.D12G167500 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED D12 - View
Glycine max Glyma.18G260500 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm18 + View
Glycine max Glyma.17G101000 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm17 + View
Glycine max Glyma.05G025900 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm05 - View
Glycine max Glyma.04G168300 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm04 - View
Glycine max Glyma.02G108600 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm02 + View
Glycine max Glyma.06G194800 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm06 + View
Gossypium raimondii Gorai.008G180400 Chr08 - View
Gossypium raimondii Gorai.008G193700 Chr08 + View
Helianthus annuus HanXRQChr08g0210891 Probable dof zinc finger protein DOF1.3 HanXRQChr08 - View
Lupinus albus Lalb_Chr13g0303181 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lalb_Chr13 - View
Lupinus albus Lalb_Chr06g0175291 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Lalb_Chr06 - View
Lupinus albus Lalb_Chr08g0235691 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lalb_Chr08 - View
Lupinus albus Lalb_Chr17g0340791 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lalb_Chr17 + View
Lupinus albus Lalb_Chr21g0318671 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Lalb_Chr21 - View
Lotus japonicus Lj1g0017181 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED chr1 + View
Lotus japonicus Lj4g0015965 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED chr4 - View
Lotus japonicus Lj2g0003484 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED chr2 + View
Lonicera japonica Lj9A464T86 GWHAAZE00000009 + View
Lonicera japonica Lj3A1036T38 GWHAAZE00000003 - View
Lonicera japonica Lj5A110T126 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_4_108141 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_1_14020 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lsat_1_v8_lg_1 + View
Lactuca sativa Lsat_1_v5_gn_5_19880 PTHR31089:SF1 - CYCLIC DOF FACTOR 4-RELATED Lsat_1_v8_lg_5 - View
Malus domestica MD13G1070600 cycling DOF factor 2 Chr13 - View
Malus domestica MD14G1201600 cycling DOF factor 3 Chr14 + View
Malus domestica MD06G1194500 cycling DOF factor 3 Chr06 + View
Malus domestica MD16G1071400 cycling DOF factor 2 Chr16 - View
Manihot esculenta Manes.14G079000 Chromosome14 + View
Manihot esculenta Manes.06G091600 Chromosome06 - View
Medicago truncatula Medtr3g435480 DOF-type zinc finger DNA-binding family protein chr3 - View
Nicotiana tabacum Nitab4.5_0000014g0070 Zinc finger, Dof-type Nitab4.5_0000014 + View
Olea europaea Oeu047289.1 chr10 - View
Petunia axillaris Peaxi162Scf00274g00447 Dof-type zinc finger DNA-binding family protein Peaxi162Scf00274 - View
Petunia axillaris Peaxi162Scf00013g00429 Dof-type zinc finger DNA-binding family protein Peaxi162Scf00013 + View
Punica granatum PGR083G1369 NC_045133.1 + View
Punica granatum PGR119G1540 NC_045132.1 - View
Punica granatum PGR044G1752 NC_045134.1 - View
Punica granatum PGR004G1734 NC_045131.1 - View
Prunus persica Prupe.5G194600 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Pp05 + View
Papaver somniferum PSO478G3373 NC_039361.1 + View
Populus trichocarpa Potri.017G084600 PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED Chr17 + View
Populus trichocarpa Potri.010G167600 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr10 - View
Populus trichocarpa Potri.008G087800 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr08 + View
Phaseolus vulgaris Phvul.003G189300 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr03 - View
Phaseolus vulgaris Phvul.009G186600 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr09 - View
Quercus lobata QL03p068694 3 - View
Quercus lobata QL10p017159 10 + View
Quercus lobata QL02p082478 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr7g0181561 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim08G0154300 chr08 - View
Striga asiatica SGA_v2.0_scaffold114G31909 scaffold114 + View
Striga asiatica SGA_v2.0_scaffold56G20002 scaffold56 - View
Salvia bowleyana SalBow5G2876 GWHASIU00000003 - View
Salix brachista Sabra10G0127400 GWHAAZH00000010 - View
Salix brachista Sabra08G0065600 GWHAAZH00000008 + View
Simmondsia chinensis Sc10g0003530 GWHAASQ00000010 - View
Simmondsia chinensis Sc04g0002690 GWHAASQ00000004 + View
Simmondsia chinensis Sc11g0002010 GWHAASQ00000011 + View
Sechium edule Sed0004076 LG01 - View
Sechium edule Sed0023411 LG08 + View
Sechium edule Sed0016004 LG12 + View
Sechium edule Sed0027222 LG08 + View
Solanum lycopersicum Solyc03g115940.4 Dof zinc finger protein (AHRD V3.3 *** A0A2K3MQ38_TRIPR) SL4.0ch03 - View
Solanum lycopersicum Solyc06g069760.3 Dof zinc finger protein (AHRD V3.3 *** A0A2K3MQ38_TRIPR) SL4.0ch06 - View
Schrenkiella parvula Sp1g22010 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED ch1-1 + View
Schrenkiella parvula Sp5g24690 PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED ch5-6 - View
Solanum pennellii Sopen03g034940 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. | cycling DOF factor 3 (CDF3) | CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type | BEST Arabidopsis thaliana protein match is: cycling DOF factor 1 Spenn-ch03 - View
Solanum pennellii Sopen06g027050 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. | cycling DOF factor 3 (CDF3) | CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type | BEST Arabidopsis thaliana protein match is: cycling DOF factor 1 Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400033046 Dof zinc finger protein ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400019528 Dof zinc finger protein ST4.03ch03 - View
Solanum tuberosum PGSC0003DMG400001330 Zinc finger protein ST4.03ch02 - View
Selenicereus undatus Hund02642 Scaffold_33678 - View
Trochodendron aralioides TAR629G3217 group0 - View
Trochodendron aralioides TAR371G0107 group13 + View
Theobroma cacao Thecc.03G090000 Cycling DOF factor 2 Chromosome_3 + View
Theobroma cacao Thecc.04G083700 Dof zinc finger protein DOF5.2 Chromosome_4 + View
Tarenaya hassleriana THA.LOC104822909 cyclic dof factor 5-like NW_010966822.1 - View
Tripterygium wilfordii TWI60G1576 NC_052246.1 + View
Tripterygium wilfordii TWI81G0986 NC_052251.1 + View
Tripterygium wilfordii TWI32G0507 NC_052254.1 + View
Tripterygium wilfordii TWI34G0912 NC_052235.1 - View
Tripterygium wilfordii TWI15G1180 NC_052247.1 - View
Vaccinium macrocarpon vmacro17536 Similar to CDF3: Cyclic dof factor 3 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G1521 CM024072.1 + View
Vigna mungo VMungo1215G0120 CM024074.1 + View
Vitis vinifera GSVIVG01019969001 chr1 + View
Vitis vinifera GSVIVG01007992001 chr17 + View
Vitis vinifera GSVIVG01011433001 chr14 + View