Gene: Sopen03g034940

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g034940
  • Transcript Identifier Sopen03g034940.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 69986229-69988419 : negative

Gene Family Information

  • ID HOM05D000715
  • #Genes/#Species 808/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g034940.1

Descriptions

  • Description Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. | cycling DOF factor 3 (CDF3) | CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type | BEST Arabidopsis thaliana protein match is: cycling DOF factor 1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G62430
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT5G39660
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT5G62430
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G62430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G62430
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G39660
GO:0000978
ISO
PLAZA Integrative OrthologyRNA polymerase II cis-regulatory region sequence-specific DNA binding AT5G62430
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G39660
GO:0001227
ISO
PLAZA Integrative OrthologyDNA-binding transcription repressor activity, RNA polymerase II-specific AT5G62430

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G62430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR003851 Zinc finger, Dof-type
Mapman id Description
15.5.1.5 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF)