Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia34113 Lachesis_group3 + View
Arabidopsis lyrata AL7G27520 scaffold_7 - View
Arabidopsis lyrata AL8G26690 scaffold_8 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.06RI6S PTHR33836//PTHR33836:SF1 - FAMILY NOT NAMED // ARM REPEAT SUPERFAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EQ3RBX PTHR33836//PTHR33836:SF1 - FAMILY NOT NAMED // ARM REPEAT SUPERFAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.E2ZRS1 PTHR33836//PTHR33836:SF1 - FAMILY NOT NAMED // ARM REPEAT SUPERFAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT4G25580 CAP160 protein CAP160 protein%3B CONTAINS InterPro DOMAIN/s: CAP160 (InterPro:IPR012418)%3B BEST Arabidopsis thaliana protein match is: CAP160 protein (TAIR:AT5G52300.1)%3B Has 292 Blast hits to 249 proteins in 85 species: Archae - 0%3B Bacteria - 26%3B Metazoa - 66%3B Fungi - 33%3B Plants - 116%3B Viruses - 9%3B Other Eukaryotes - 42 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT5G52300 CAP160 protein encodes a protein that is induced in expression in response to water deprivation such as cold%2C high-salt%2C and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants%2C animals and fungi. LOW-TEMPERATURE-INDUCED 65 (LTI65)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: response to water deprivation%2C response to salt stress%2C response to cold%2C abscisic acid mediated signaling pathway%2C response to abscisic acid stimulus%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: leaf%2C seed%3B EXPRESSED DURING: dry seed stage%2C LP.04 four leaves visible%3B CONTAINS InterPro DOMAIN/s: CAP160 (InterPro:IPR012418)%3B BEST Arabidopsis thaliana protein match is: CAP160 protein (TAIR:AT4G25580.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0680G076 AmTr_v1.0_scaffold00009 - View
Brassica carinata BcaC06g32799 ChrC06 - View
Brassica carinata BcaC01g06182 ChrC01 + View
Brassica carinata BcaB01g04200 ChrB01 + View
Brassica carinata BcaB05g21946 ChrB05 + View
Brassica carinata BcaC07g38200 ChrC07 + View
Brassica napus C02p19870 C02 - View
Brassica napus A03p56110 A03 + View
Brassica napus C03p18370 C03 - View
Brassica napus A03p15730 A03 - View
Brassica napus C07p54440 C07 + View
Brassica napus A02p11890 A02 - View
Brassica oleracea BolC7t45929H C7 + View
Brassica oleracea BolC8t48624H C8 + View
Brassica oleracea BolC3t14234H C3 - View
Brassica oleracea BolC2t08122H C2 - View
Brassica rapa BraA02t06255Z A02 - View
Brassica rapa BraA03t10863Z A03 - View
Brassica rapa BraA03t14684Z A03 + View
Beta vulgaris EL10Ac3g05642 PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Chr3_EL10_PGA_scaffold7 - View
Camellia sinensis var. sinensis CSS0002108 unnamed protein product [Coffea canephora] Chr1 - View
Cannabis sativa CANSAT21G0752 NC_044374.1 + View
Cicer arietinum L. Ca_10770_v3 Ca_LG4_v3 - View
Corylus avellana Haze_13708 Protein of unknown function 5 - View
Citrus clementina Ciclev10004574m.g scaffold_9 + View
Ceratophyllum demersum CDE08G1026 6 + View
Carpinus fangiana Cfa008320 Cfa03 + View
Cardamine hirsuta CARHR233000 Low-temperature-induced 65 kDa protein Chr7 + View
Cardamine hirsuta CARHR265280 Low-temperature-induced 65 kDa protein Chr8 + View
Carya illinoinensis CiPaw.03G106300 PTHR33836//PTHR33836:SF1 - FAMILY NOT NAMED // ARM REPEAT SUPERFAMILY PROTEIN-RELATED Chr03 + View
Corchorus olitorius COL.COLO4_14310 Low temperature responsive protein AWUE01015408.1 + View
Carica papaya Cpa.g.sc107.53 supercontig_107 + View
Chenopodium quinoa AUR62015982 LTI65: Low-temperature-induced 65 kDa protein C_Quinoa_Scaffold_3256 - View
Chenopodium quinoa AUR62021191 LTI65: Low-temperature-induced 65 kDa protein C_Quinoa_Scaffold_1783 - View
Capsella rubella Carub.0008s1240 PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED scaffold_8 + View
Capsella rubella Carub.0007s1540 PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED scaffold_7 - View
Daucus carota DCAR_018199 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv28441 GWHABJS00000004 - View
Erigeron canadensis ECA238G1803 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA233G5127 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.A02790 Chr01 - View
Erythranthe guttata Migut.F01119 scaffold_6 - View
Erythranthe guttata Migut.F00339 scaffold_6 - View
Eutrema salsugineum Thhalv10015427m.g PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED scaffold_2 - View
Eutrema salsugineum Thhalv10024860m.g PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED scaffold_1 - View
Gossypium hirsutum Gohir.D12G259100 PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED D12 - View
Gossypium hirsutum Gohir.A12G257800 PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED A12 - View
Glycine max Glyma.10G236000 PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Gm10 - View
Glycine max Glyma.09G139600 KOG4815 - Muscular protein implicated in muscular dystrophy phenotype Gm09 + View
Glycine max Glyma.20G158500 PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Gm20 + View
Glycine max Glyma.16G183700 Gm16 - View
Gossypium raimondii Gorai.008G277500 Chr08 - View
Helianthus annuus HanXRQChr07g0207021 Uncharacterized protein, conserved in plant genome(s), supported by expression data HanXRQChr07 - View
Lupinus albus Lalb_Chr19g0130831 PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Lalb_Chr19 - View
Lupinus albus Lalb_Chr21g0305031 PTHR33836//PTHR33836:SF1 - FAMILY NOT NAMED // ARM REPEAT SUPERFAMILY PROTEIN-RELATED Lalb_Chr21 + View
Lotus japonicus Lj2g0010006 PF07918 - CAP160 repeat (CAP160) chr2 + View
Lotus japonicus Lj5g0019959 PTHR33836//PTHR33836:SF1 - FAMILY NOT NAMED // ARM REPEAT SUPERFAMILY PROTEIN-RELATED chr5 + View
Lonicera japonica Lj8A24G36 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_8_8621 Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_2_132020 PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Lsat_1_v8_lg_2 - View
Malus domestica MD07G1268800 CAP160 protein Chr07 + View
Malus domestica MD01G1201000 CAP160 protein Chr01 + View
Manihot esculenta Manes.06G147200 Chromosome06 + View
Medicago truncatula Medtr1g100607 hypothetical protein chr1 - View
Nicotiana tabacum Nitab4.5_0000716g0020 CAP160 Nitab4.5_0000716 - View
Olea europaea Oeu024223.1 chr11 - View
Olea europaea Oeu056256.2 scaffold716 + View
Petunia axillaris Peaxi162Scf00444g00847 CAP160 protein Peaxi162Scf00444 - View
Punica granatum PGR042G0303 NC_045130.1 - View
Prunus persica Prupe.2G294400 Pp02 + View
Pisum sativum Psat6g199400 Unknown gene chr6LG2 - View
Papaver somniferum PSO478G0985 NC_039361.1 + View
Papaver somniferum PSO782G0005 NC_039365.1 + View
Populus trichocarpa Potri.012G141300 PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Chr12 + View
Populus trichocarpa Potri.015G143950 PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Chr15 + View
Phaseolus vulgaris Phvul.007G069800 PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Chr07 + View
Phaseolus vulgaris Phvul.004G117100 KOG0108//KOG4744 - mRNA cleavage and polyadenylation factor I complex, subunit RNA15 // Uncharacterized conserved protein Chr04 + View
Rhododendron simsii Rhsim03G0180900 chr03 + View
Striga asiatica SGA_v2.0_scaffold60G21043 scaffold60 + View
Salvia bowleyana SalBow2G2574 GWHASIU00000007 - View
Salix brachista Sabra15G0153700 GWHAAZH00000015 + View
Simmondsia chinensis Sc19g0001510 GWHAASQ00000019 - View
Sechium edule Sed0019460 LG05 - View
Solanum lycopersicum Solyc03g025810.4 Low-temperature-induced 65 kDa protein (AHRD V3.3 *-* LTI65_ARATH) SL4.0ch03 - View
Solanum lycopersicum Solyc01g009660.3 Low-temperature-induced 65 kDa protein (AHRD V3.3 *** A0A1J3DLF3_NOCCA) SL4.0ch01 - View
Schrenkiella parvula Sp6g14560 PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED ch6-6 + View
Schrenkiella parvula Sp7g23610 PTHR33836//PTHR33836:SF1 - FAMILY NOT NAMED // ARM REPEAT SUPERFAMILY PROTEIN-RELATED ch7-4 + View
Solanum pennellii Sopen03g004620 encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi. | LOW-TEMPERATURE-INDUCED 65 (LTI65) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to water deprivation, response to salt stress, response to cold, abscisic acid mediated signaling pathway, response to abscisic acid stimulus | LOCATED IN: cellular_component unknown | EXPRESSED IN: leaf, seed | EXPRESSED DURING: dry seed stage, LP.04 four leaves visible | CONTAINS InterPro DOMAIN/s: CAP160 | BEST Arabidopsis thaliana protein match is: CAP160 protein Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400014293 Low-temperature-induced 65 kDa protein ST4.03ch03 + View
Selenicereus undatus Hund04742 Scaffold_19641 + View
Selenicereus undatus Hund11746 Scaffold_33679 - View
Trochodendron aralioides TAR374G0772 group12 + View
Theobroma cacao Thecc.03G176700 CAP160 protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104800253 low-temperature-induced 65 kDa protein-like isoform X1 NW_010969135.1 - View
Tarenaya hassleriana THA.LOC104811978 low-temperature-induced 65 kDa protein-like NW_010965372.1 - View
Trifolium pratense TPR.G14322 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI23G0464 NC_052239.1 - View
Utricularia gibba unitig_46.g18790 unitig_46 + View
Vaccinium macrocarpon vmacro06681 Similar to LTI65: Low-temperature-induced 65 kDa protein (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G0841 CM024071.1 - View
Vitis vinifera GSVIVG01028976001 chr16 + View