Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G13740 ABI five binding protein 2 Encodes a member of a small plant-specific gene family whose members interact with ABI5 and appear to be involved in mediating stress responses. AFP2 mutants affect a number of ABA mediated processes such as germination and response to osmotic and sugar stress. AFP2 nuclear localization is stress dependent. ABI five binding protein 2 (AFP2)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463)%3B BEST Arabidopsis thaliana protein match is: ABI five binding protein (TAIR:AT1G69260.1)%3B Has 207 Blast hits to 201 proteins in 26 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 5%3B Fungi - 6%3B Plants - 185%3B Viruses - 3%3B Other Eukaryotes - 8 (source: NCBI BLink). Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G18500 LG-3 + View
Acer truncatum Atru.chr9.563 chr9 + View
Actinidia chinensis Actinidia18988 Lachesis_group9 - View
Actinidia chinensis Actinidia16132 Lachesis_group13 - View
Actinidia chinensis Actinidia35039 Lachesis_group2 - View
Actinidia chinensis Actinidia04821 Lachesis_group1 - View
Arabidopsis lyrata AL1G25530 scaffold_1 + View
Arabidopsis lyrata AL6G18380 scaffold_6 - View
Avicennia marina MSTRG.11336 ScioBoG_14204_HRSCAF_14270 + View
Amaranthus hybridus Ah.11g047690 Glycerophosphodiester phosphodiesterase GDPD6 (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase 6) (ATGDPD6) AmaHy_arrow1_Scaffold_11 + View
Aquilegia oxysepala Aqoxy3G03681 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1FS3I4 PTHR31413//PTHR31413:SF4 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP1-RELATED arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.32Y4H5 K01126 - glycerophosphoryl diester phosphodiesterase (E3.1.4.46, glpQ, ugpQ) arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NADZ26 PTHR31413//PTHR31413:SF4 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP1-RELATED arahy.Tifrunner.gnm1.Arahy.10 + View
Brassica carinata BcaB08g37296 ChrB08 + View
Brassica napus A10p28600 A10 + View
Brassica napus C09p68890 C09 + View
Brassica oleracea BolC9t59635H C9 + View
Brassica rapa BraA10t44909Z A10 + View
Beta vulgaris EL10Ac5g11140 K01126 - glycerophosphoryl diester phosphodiesterase (E3.1.4.46, glpQ, ugpQ) Chr5_EL10_PGA_scaffold2 - View
Camellia sinensis var. sinensis CSS0018238 hypothetical protein PRUPE_ppa006823mg [Prunus persica] Chr2 + View
Camellia sinensis var. sinensis CSS0048536 hypothetical protein PRUPE_ppa006823mg [Prunus persica] Chr15 - View
Capsicum annuum CAN.G587.46 PGAv.1.6.scaffold587 - View
Cicer arietinum L. Ca_21767_v3 Ca_LG7_v3 + View
Corylus avellana Haze_07735 Similar to GDPD6: Glycerophosphodiester phosphodiesterase GDPD6 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc11_g11930 Putative Ninja-family protein AFP2 chr11 + View
Citrus clementina Ciclev10020540m.g scaffold_3 - View
Ceratophyllum demersum CDE04G1420 2 + View
Ceratophyllum demersum CDE06G1911 4 + View
Cardamine hirsuta CARHR014140 Ninja-family protein 3 Chr1 + View
Cardamine hirsuta CARHR205150 Glycerophosphoryl diester phosphodiesterase, putative Chr6 + View
Carya illinoinensis CiPaw.11G054200 K01126 - glycerophosphoryl diester phosphodiesterase (E3.1.4.46, glpQ, ugpQ) Chr11 - View
Carya illinoinensis CiPaw.12G008900 PTHR31413:SF4 - NINJA-FAMILY PROTEIN AFP1-RELATED Chr12 - View
Citrullus lanatus ClCG04G011760 Ninja-family protein 8 CG_Chr04 + View
Cucumis melo MELO3C002034.2 ninja-family protein 6-like isoform X2 chr12 + View
Cucumis melo MELO3C012155.2 ninja-family protein AFP3-like chr10 + View
Chenopodium quinoa AUR62021548 GDPD6: Glycerophosphodiester phosphodiesterase GDPD6 C_Quinoa_Scaffold_1675 + View
Chenopodium quinoa AUR62008543 Protein of unknown function C_Quinoa_Scaffold_3422 - View
Capsella rubella Carub.0006s0692 K01126 - glycerophosphoryl diester phosphodiesterase (E3.1.4.46, glpQ, ugpQ) scaffold_6 - View
Cucumis sativus L. CsaV3_1G006010 Glycerophosphodiester phosphodiesterase chr1 - View
Daucus carota DCAR_025435 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv22773 GWHABJS00000019 + View
Davidia involucrata Dinv17423 GWHABJS00000006 + View
Durio zibethinus Duzib205G0487 NW_019168381.1 - View
Durio zibethinus Duzib068G0186 NW_019167838.1 - View
Durio zibethinus Duzib084G0602 NW_019167827.1 - View
Erigeron canadensis ECA246G0136 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.B03147 Chr02 + View
Eucalyptus grandis Eucgr.B00600 Chr02 - View
Eutrema salsugineum Thhalv10013858m.g K01126 - glycerophosphoryl diester phosphodiesterase (E3.1.4.46, glpQ, ugpQ) scaffold_2 - View
Eutrema salsugineum Thhalv10008099m.g PTHR31413:SF4 - NINJA-FAMILY PROTEIN AFP1-RELATED scaffold_5 - View
Fragaria x ananassa FAN08G2806 K01126 - glycerophosphoryl diester phosphodiesterase (E3.1.4.46, glpQ, ugpQ) Fvb5-3 - View
Fragaria x ananassa FAN13G0676 K01126 - glycerophosphoryl diester phosphodiesterase (E3.1.4.46, glpQ, ugpQ) Fvb5-2 + View
Fragaria x ananassa FAN18G0473 PTHR31413//PTHR31413:SF4 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP1-RELATED Fvb5-1 + View
Fragaria vesca FvH4_5g13760 PTHR31413:SF4 - NINJA-FAMILY PROTEIN AFP1-RELATED Fvb5 + View
Gossypium hirsutum Gohir.D07G072700 K01126 - glycerophosphoryl diester phosphodiesterase (E3.1.4.46, glpQ, ugpQ) D07 + View
Gossypium hirsutum Gohir.D12G186100 PF16135//PF16136 - TPL-binding domain in jasmonate signalling (Jas) // Putative nuclear localisation signal (NINJA_B) D12 - View
Gossypium hirsutum Gohir.D07G205200 PTHR31413//PTHR31413:SF4 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP1-RELATED D07 + View
Gossypium hirsutum Gohir.A07G068200 K01126 - glycerophosphoryl diester phosphodiesterase (E3.1.4.46, glpQ, ugpQ) A07 + View
Gossypium hirsutum Gohir.A07G198750 PTHR31413//PTHR31413:SF4 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP1-RELATED A07 + View
Gossypium hirsutum Gohir.A12G160800 PF07897//PF16135//PF16136 - Ethylene-responsive binding factor-associated repression (EAR) // TPL-binding domain in jasmonate signalling (Jas) // Putative nuclear localisation signal (NINJA_B) A12 + View
Gossypium hirsutum Gohir.A12G183000 PF16135//PF16136 - TPL-binding domain in jasmonate signalling (Jas) // Putative nuclear localisation signal (NINJA_B) A12 - View
Glycine max Glyma.05G020400 PTHR31413//PTHR31413:SF4 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP1-RELATED Gm05 + View
Glycine max Glyma.17G078900 K01126 - glycerophosphoryl diester phosphodiesterase (E3.1.4.46, glpQ, ugpQ) Gm17 - View
Glycine max Glyma.06G204100 PTHR31413//PTHR31413:SF4 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP1-RELATED Gm06 - View
Glycine max Glyma.04G162100 PTHR31413//PTHR31413:SF4 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP1-RELATED Gm04 + View
Gossypium raimondii Gorai.001G076900 Chr01 + View
Gossypium raimondii Gorai.008G199500 Chr08 - View
Gossypium raimondii Gorai.001G231200 Chr01 + View
Hydrangea macrophylla Hma1.2p1_0060F.1_g033030 Hma1.2p1_0060F.1 + View
Lupinus albus Lalb_Chr07g0178321 K01126 - glycerophosphoryl diester phosphodiesterase (E3.1.4.46, glpQ, ugpQ) Lalb_Chr07 - View
Lupinus albus Lalb_Chr12g0197231 PTHR31413:SF4 - NINJA-FAMILY PROTEIN AFP1-RELATED Lalb_Chr12 - View
Lupinus albus Lalb_Chr13g0302821 K01126 - glycerophosphoryl diester phosphodiesterase (E3.1.4.46, glpQ, ugpQ) Lalb_Chr13 + View
Lotus japonicus Lj4g0026500 PTHR31413//PTHR31413:SF4 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP1-RELATED chr4 + View
Lonicera japonica Lj5C102G6 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_5_22440 Lsat_1_v8_lg_5 - View
Malus domestica MD06G1225600 PLC-like phosphodiesterases superfamily protein Chr06 - View
Malus domestica MD14G1212500 PLC-like phosphodiesterases superfamily protein Chr14 - View
Manihot esculenta Manes.06G084000 Chromosome06 + View
Manihot esculenta Manes.14G086100 Chromosome14 - View
Medicago truncatula Medtr4g109600 glycerophosphoryl diester phosphodiesterase family protein chr4 - View
Nelumbo nucifera Nn3g17460 chr3 - View
Nelumbo nucifera Nn4g23438 chr4 - View
Olea europaea Oeu048138.1 chr12 - View
Oryza sativa ssp. japonica Os07g0602800 Similar to glycerophosphoryl diester phosphodiesterase. chr07 - View
Petunia axillaris Peaxi162Scf00013g00645 Glycerophosphoryl diester phosphodiesterase Peaxi162Scf00013 - View
Punica granatum PGR083G0437 NC_045133.1 - View
Prunus persica Prupe.5G205800 Pp05 - View
Pisum sativum Psat4g047720 Glycerophosphoryl diester phosphodiesterase family chr4LG4 + View
Papaver somniferum PSO017G0362 NC_039362.1 - View
Papaver somniferum PSO478G3209 NC_039361.1 + View
Phaseolus vulgaris Phvul.003G184200 PTHR31413:SF4 - NINJA-FAMILY PROTEIN AFP1-RELATED Chr03 + View
Quercus lobata QL10p019706 10 - View
Rosa chinensis RcHm_v2.0_Chr7g0183171 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim08G0145000 chr08 + View
Simmondsia chinensis Sc04g0007540 GWHAASQ00000004 + View
Sechium edule Sed0016913 LG08 - View
Sechium edule Sed0008931 LG01 + View
Solanum lycopersicum Solyc06g069470.3 Glycerophosphodiester phosphodiesterase GDPD5 (AHRD V3.3 *** A0A2G2WM22_CAPBA) SL4.0ch06 + View
Solanum lycopersicum Solyc04g005380.3 Ninja-family protein AFP3 (AHRD V3.3 *** A0A2G3CFM6_CAPCH) SL4.0ch04 + View
Solanum lycopersicum Solyc05g012210.4 Ninja-family protein AFP3 (AHRD V3.3 *** A0A2G3CFM6_CAPCH) SL4.0ch05 + View
Schrenkiella parvula Sp6g34910 K01126 - glycerophosphoryl diester phosphodiesterase (E3.1.4.46, glpQ, ugpQ) ch6-6 + View
Schrenkiella parvula Sp5g24320 PTHR31413//PTHR31413:SF4 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP1-RELATED ch5-6 + View
Solanum pennellii Sopen04g001370 ABI five binding protein (AFP1) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 | BEST Arabidopsis thaliana protein match is: ABI five binding protein 2 Spenn-ch04 + View
Solanum pennellii Sopen06g026760 PLC-like phosphodiesterases superfamily protein | FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity | INVOLVED IN: glycerol metabolic process, lipid metabolic process | LOCATED IN: vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain , Glycerophosphoryl diester phosphodiesterase | BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein Spenn-ch06 + View
Solanum pennellii Sopen05g007040 ABI five binding protein 3 (AFP3) | FUNCTIONS IN: protein binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 17 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 | BEST Arabidopsis thaliana protein match is: ABI five binding protein Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG400004067 Glycerophosphoryl diester phosphodiesterase ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400028315 Ninja-family protein AFP2 ST4.03ch05 - View
Selenicereus undatus Hund02578 Scaffold_33678 + View
Trochodendron aralioides TAR629G2686 group0 + View
Trochodendron aralioides TAR371G0632 group13 - View
Theobroma cacao Thecc.03G102600 PLC-like phosphodiesterases superfamily protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104818348 glycerophosphodiester phosphodiesterase GDPD6 NW_010966092.1 - View
Trifolium pratense TPR.G12243 Tp57577_TGAC_v2_LG3 - View
Trifolium pratense TPR.G2011 Tp57577_TGAC_v2_LG5 + View
Tripterygium wilfordii TWI15G0810 NC_052247.1 + View
Tripterygium wilfordii TWI60G1265 NC_052246.1 + View
Vaccinium macrocarpon vmacro16492 Similar to GDPD5: Glycerophosphodiester phosphodiesterase GDPD5 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G3378 CM024074.1 - View
Vitis vinifera GSVIVG01007848001 chr17 - View