Gene: AT5G08030

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G08030
  • Transcript Identifier AT5G08030.2
  • Gene Type Coding gene
  • Location Chr5 : 2575152-2576815 : negative

Gene Family Information

  • ID HOM05D000813
  • #Genes/#Species 727/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G08030.2
  • symbol GDPD6
  • Alias AtGDPD6
  • full_name glycerophosphodiester phosphodiesterase 6
  • uniprot Q9SD81

Descriptions

  • Description PLC-like phosphodiesterases superfamily protein
  • Computational description PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT1G74210.1); Has 6803 Blast hits to 6670 proteins in 1728 species: Archae - 62; Bacteria - 5228; Metazoa - 196; Fungi - 127; Plants - 339; Viruses - 7; Other Eukaryotes - 844 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006629
IEA
Gene Ontologylipid metabolic process
GO:0006629
IEA
InterProlipid metabolic process
GO:0006071
IEA
GOA Databaseglycerol metabolic process
GO:0007165
ISO
PLAZA Homology (enrichment)signal transduction HOM05D000813

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008889
IBA
IEA
Gene Ontologyglycerophosphodiester phosphodiesterase activity1
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008081
IEA
GOA Databasephosphoric diester hydrolase activity
GO:0008081
IEA
InterProphosphoric diester hydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
IBA
Gene Ontologyvacuole1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
IPR030395 Glycerophosphodiester phosphodiesterase domain
Mapman id Description
35.1 not assigned.annotated