Gene: Solyc04g005380.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc04g005380.3
- Transcript Identifier Solyc04g005380.3.1
- Gene Type Coding gene
- Location SL4.0ch04 : 290479-294731 : positive
Gene Family Information
- ID HOM05D000813
- #Genes/#Species 727/97
- Phylogenetic origin
- ID ORTHO05D000995
- #Genes/#Species 526/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc04g005380.3.1
- uniprot A0A3Q7FWU6
- gene_id Solyc04g005380
Descriptions
- Description Ninja-family protein AFP3 (AHRD V3.3 *** A0A2G3CFM6_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007165 | IEA | GOA Database | signal transduction | |
| GO:0007165 | IEA | InterPro | signal transduction | |
| GO:0045892 | IBA | GOA Database | negative regulation of transcription, DNA-templated | |
| GO:0009737 | IBA | GOA Database | response to abscisic acid | |
| GO:0009738 | ISO | PLAZA Integrative Orthology | abscisic acid-activated signaling pathway | AT1G69260 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT1G13740 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G13740 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.51.3 | RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional co-repressor (AFP/NINJA) |