Gene: Sopen06g025410

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g025410
  • Transcript Identifier Sopen06g025410.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 52734232-52736705 : positive

Gene Family Information

  • ID HOM05D000771
  • #Genes/#Species 762/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g025410.1

Descriptions

  • Description Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. | methyl-CPG-binding domain 10 (MBD10) | FUNCTIONS IN: methyl-CpG binding, DNA binding | INVOLVED IN: biological_process unknown | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Methyl-CpG DNA binding | BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 11 .
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G15340
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G15340

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039622 Methyl-CpG-binding domain-containing protein 10/11
IPR016177 DNA-binding domain superfamily
IPR001739 Methyl-CpG DNA binding
Mapman id Description
12.5.4.3 Chromatin organisation.DNA methylation.cytosine methylation reader activities.methylation reader (MBD10-11)