Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G03850 Nucleic acid-binding, OB-fold-like protein Nucleic acid-binding%2C OB-fold-like protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%2C ribosome biogenesis%3B LOCATED IN: cytosolic small ribosomal subunit%2C ribosome%2C cell wall%2C plasma membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Ribosomal protein S28e (InterPro:IPR000289)%3B BEST Arabidopsis thaliana protein match is: Nucleic acid-binding%2C OB-fold-like protein (TAIR:AT3G10090.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G2640 LG-3 - View
Aethionema arabicum Aa31LG1G21420 LG-1 + View
Arabidopsis lyrata AL3G21430 scaffold_3 - View
Arabidopsis lyrata AL6G13420 scaffold_6 - View
Brassica carinata BcaC06g32089 ChrC06 - View
Brassica carinata BcaB01g05779 ChrB01 + View
Brassica carinata BcaC03g12978 ChrC03 + View
Brassica carinata BcaB05g21800 ChrB05 + View
Brassica napus A10p32260 A10 + View
Brassica napus A03p01430 A03 - View
Brassica napus C03p01760 C03 - View
Brassica napus C02p01570 C02 - View
Brassica napus C09p73080 C09 + View
Brassica oleracea BolC2t06122H C2 - View
Brassica oleracea BolC3t12731H C3 - View
Brassica oleracea BolC9t60043H C9 + View
Brassica rapa BraA03t09522Z A03 - View
Brassica rapa BraA02t04788Z A02 - View
Brassica rapa BraA10t45269Z A10 + View
Cardamine hirsuta CARHR084590 40S ribosomal protein S28 Chr3 - View
Cardamine hirsuta CARHR209410 40S ribosomal protein S28 Chr6 + View
Capsella rubella Carub.0003s0927 K02979 - small subunit ribosomal protein S28e (RP-S28e, RPS28) scaffold_3 - View
Capsella rubella Carub.0006s0279 K02979 - small subunit ribosomal protein S28e (RP-S28e, RPS28) scaffold_6 - View
Eutrema salsugineum Thhalv10015973m.g K02979 - small subunit ribosomal protein S28e (RP-S28e, RPS28) scaffold_2 - View
Schrenkiella parvula Sp6g38880 K02979 - small subunit ribosomal protein S28e (RP-S28e, RPS28) ch6-6 + View
Tarenaya hassleriana THA.LOC109117085 40S ribosomal protein S28-1-like NW_010966881.1 + View
Tarenaya hassleriana THA.LOC109117273 40S ribosomal protein S28-1 NW_010967707.1 - View