Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG3G2540 | LG-3 | - | View | |
Acer truncatum | Atru.chr8.1639 | chr8 | - | View | |
Actinidia chinensis | Actinidia31292 | Lachesis_group20 | - | View | |
Arabidopsis lyrata | AL3G21300 | scaffold_3 | - | View | |
Avicennia marina | MSTRG.19228 | ScioBoG_25048_HRSCAF_25167 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.K8W5NT | PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED | arahy.Tifrunner.gnm1.Arahy.02 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.AM3VD0 | PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED | arahy.Tifrunner.gnm1.Arahy.12 | - | View |
Beta vulgaris | EL10Ac7g16995 | PF15628//PF15629 - RRM in Demeter (RRM_DME) // Permuted single zf-CXXC unit (Perm-CXXC) | Chr7_EL10_PGA_scaffold5 | - | View |
Capsicum annuum | CAN.G824.26 | PGAv.1.6.scaffold824 | + | View | |
Cicer arietinum L. | Ca_11623_v3 | Ca_LG4_v3 | + | View | |
Corylus avellana | Haze_19533 | Similar to ROS1A: Protein ROS1A (Oryza sativa subsp. japonica OX%3D39947) | 10 | + | View |
Coffea canephora | Cc06_g05230 | Putative Repressor of silencing 1 | chr6 | + | View |
Citrus clementina | Ciclev10010892m.g | scaffold_6 | - | View | |
Cardamine hirsuta | CARHR084510 | DNA glycosylase | Chr3 | - | View |
Carya illinoinensis | CiPaw.09G008500 | PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED | Chr09 | + | View |
Citrullus lanatus | ClCG04G009770 | DEMETER | CG_Chr04 | + | View |
Citrullus lanatus | ClCG10G019400 | Repressor of silencing 1 | CG_Chr10 | - | View |
Cucumis melo | MELO3C009432.2 | protein ROS1 | chr04 | - | View |
Cucumis melo | MELO3C024516.2 | protein ROS1 | chr08 | - | View |
Carica papaya | Cpa.g.sc5.80 | supercontig_5 | - | View | |
Chenopodium quinoa | AUR62033581 | DME: Transcriptional activator DEMETER | C_Quinoa_Scaffold_1776 | - | View |
Capsella rubella | Carub.0003s0911 | 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase | scaffold_3 | - | View |
Cucumis sativus L. | CsaV3_3G036780 | protein ROS1 | chr3 | + | View |
Davidia involucrata | Dinv19826 | GWHABJS00000015 | + | View | |
Davidia involucrata | Dinv21259 | GWHABJS00000021 | - | View | |
Durio zibethinus | Duzib093G0950 | NW_019167937.1 | - | View | |
Eutrema salsugineum | Thhalv10019961m.g | PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED | scaffold_13 | + | View |
Fragaria x ananassa | FAN02G1301 | PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED | Fvb6-4 | + | View |
Glycine max | Glyma.13G151000 | 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase | Gm13 | + | View |
Glycine max | Glyma.10G065900 | PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED | Gm10 | + | View |
Glycine max | Glyma.03G190800 | PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED | Gm03 | + | View |
Lupinus albus | Lalb_Chr21g0315671 | PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED | Lalb_Chr21 | - | View |
Lotus japonicus | Lj5g0003988 | PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED | chr5 | - | View |
Lonicera japonica | Lj2A129T52 | GWHAAZE00000002 | + | View | |
Lonicera japonica | Lj3A1003T41 | GWHAAZE00000003 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_6_27040 | PF00730//PF15628//PF15629 - HhH-GPD superfamily base excision DNA repair protein (HhH-GPD) // RRM in Demeter (RRM_DME) // Permuted single zf-CXXC unit (Perm-CXXC) | Lsat_1_v8_lg_6 | + | View |
Manihot esculenta | Manes.08G020500 | Chromosome08 | + | View | |
Manihot esculenta | Manes.09G060800 | Chromosome09 | - | View | |
Medicago truncatula | Medtr1g061220 | endonuclease/exonuclease/phosphatase family protein | chr1 | - | View |
Punica granatum | PGR004G0133 | NC_045131.1 | - | View | |
Prunus persica | Prupe.7G118000 | Pp07 | - | View | |
Pisum sativum | Psat3g035920 | RRM in Demeter | chr3LG5 | - | View |
Populus trichocarpa | Potri.006G116000 | PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED | Chr06 | - | View |
Phaseolus vulgaris | Phvul.007G223600 | PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED | Chr07 | - | View |
Phaseolus vulgaris | Phvul.001G186500 | PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED | Chr01 | + | View |
Quercus lobata | QL07p040602 | 7 | - | View | |
Striga asiatica | SGA_v2.0_scaffold40G15408 | scaffold40 | - | View | |
Salix brachista | Sabra06G0090700 | GWHAAZH00000006 | - | View | |
Simmondsia chinensis | Sc02g0001140 | GWHAASQ00000002 | - | View | |
Sechium edule | Sed0001020 | LG04 | + | View | |
Solanum lycopersicum | Solyc09g009080.4 | DNA demethylase1 | SL4.0ch09 | + | View |
Solanum pennellii | Sopen09g003780 | Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele. | DEMETER (DME) | CONTAINS InterPro DOMAIN/s: DNA glycosylase , Endonuclease III-like, iron-sulphur cluster loop motif , HhH-GPD domain | BEST Arabidopsis thaliana protein match is: demeter-like 1 | Spenn-ch09 | + | View |
Solanum tuberosum | PGSC0003DMG400002719 | Repressor of silencing 1 | ST4.03ch09 | - | View |
Solanum tuberosum | PGSC0003DMG400028264 | Repressor of silencing 1 | ST4.03ch10 | + | View |
Trochodendron aralioides | TAR369G0069 | group18 | + | View | |
Theobroma cacao | Thecc.05G080600 | Repressor of gene silencing 1 | Chromosome_5 | + | View |
Tarenaya hassleriana | THA.LOC104816669 | transcriptional activator DEMETER | NW_010965775.1 | - | View |
Trifolium pratense | TPR.G5703 | Tp57577_TGAC_v2_LG1 | - | View | |
Tripterygium wilfordii | TWI77G0704 | NC_052236.1 | - | View | |
Tripterygium wilfordii | TWI53G2113 | NC_052244.1 | - | View | |
Vaccinium macrocarpon | vmacro08815 | Similar to ROS1A: Protein ROS1A (Oryza sativa subsp. japonica OX%3D39947) | chr6_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vigna mungo | VMungo1383G2283 | CM024070.1 | + | View | |
Vitis vinifera | GSVIVG01033777001 | chr8 | - | View |