Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G05150 autophagy-related protein 18E autophagy-related gene 18E (G18E)%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat (InterPro:IPR001680)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%3B BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) D (TAIR:AT3G56440.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
AT3G56440 yeast autophagy 18 D-like protein homolog of yeast autophagy 18 (ATG18) D (ATG18D)%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat (InterPro:IPR001680)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18C (TAIR:AT2G40810.2)%3B Has 1451 Blast hits to 1383 proteins in 243 species: Archae - 0%3B Bacteria - 34%3B Metazoa - 579%3B Fungi - 434%3B Plants - 212%3B Viruses - 2%3B Other Eukaryotes - 190 (source: NCBI BLink). Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G6000 LG-11 - View
Aethionema arabicum Aa31LG10G11330 LG-10 + View
Acer truncatum Atru.chr12.210 chr12 - View
Actinidia chinensis Actinidia07777 Lachesis_group21 + View
Actinidia chinensis Actinidia31643 Lachesis_group22 - View
Actinidia chinensis Actinidia01016 Lachesis_group3 + View
Actinidia chinensis Actinidia13631 Lachesis_group3 + View
Arabidopsis lyrata AL5G37770 scaffold_5 + View
Arabidopsis lyrata AL4G38720 scaffold_4 + View
Avicennia marina MSTRG.154 ScioBoG_102831_HRSCAF_103044 - View
Avicennia marina MSTRG.8390 ScioBoG_102841_HRSCAF_103114 + View
Amaranthus hybridus Ah.12g064680 Autophagy-related protein 18d (AtATG18d) AmaHy_arrow1_Scaffold_12 + View
Aquilegia oxysepala Aqoxy4G03313 CHR04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.16AZTT KOG2111 - Uncharacterized conserved protein, contains WD40 repeats arahy.Tifrunner.gnm1.Arahy.10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5B2GYG KOG2111 - Uncharacterized conserved protein, contains WD40 repeats arahy.Tifrunner.gnm1.Arahy.20 + View
Brassica carinata BcaC07g39958 ChrC07 + View
Brassica carinata BcaC01g05376 ChrC01 - View
Brassica carinata BcaB06g29178 ChrB06 + View
Brassica napus C04p68580 C04 + View
Brassica napus A09p49390 A09 + View
Brassica napus C08p31750 C08 + View
Brassica napus A04p31210 A04 + View
Brassica oleracea BolC8t50796H C8 + View
Brassica oleracea BolC4t28363H C4 + View
Brassica rapa BraA04t18577Z A04 + View
Brassica rapa BraA09t40392Z A09 + View
Beta vulgaris EL10Ac2g02690 Chr2_EL10_PGA_scaffold6 - View
Cannabis sativa CANSAT56G0945 NC_044371.1 + View
Cicer arietinum L. Ca_16849_v3 Ca_LG5_v3 + View
Corylus avellana Haze_17380 Similar to ATG18C: Autophagy-related protein 18c (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g05060 Putative WD repeat domain phosphoinositide-interacting protein 3 chr2 - View
Citrus clementina Ciclev10031671m.g scaffold_4 + View
Carpinus fangiana Cfa001182 Cfa01 - View
Cardamine hirsuta CARHR166570 WD repeat domain phosphoinositide-interacting protein Chr5 + View
Cardamine hirsuta CARHR135920 WD repeat domain phosphoinositide-interacting protein Chr4 + View
Citrullus lanatus ClCG11G005500 WD repeat-containing protein domain phosphoinositide-interacting protein 3 CG_Chr11 - View
Corchorus olitorius COL.COLO4_19493 hypothetical protein AWUE01016635.1 + View
Carica papaya Cpa.g.sc19.33 supercontig_19 - View
Capsella rubella Carub.0004s2312 PTHR11227:SF25 - AUTOPHAGY-RELATED PROTEIN 18C-RELATED scaffold_4 + View
Capsella rubella Carub.0005s2322 PTHR11227:SF25 - AUTOPHAGY-RELATED PROTEIN 18C-RELATED scaffold_5 + View
Davidia involucrata Dinv34511 GWHABJS00000009 - View
Davidia involucrata Dinv21868 GWHABJS00000004 - View
Erigeron canadensis ECA233G1197 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.J00097 Chr10 - View
Erythranthe guttata Migut.F01223 scaffold_6 - View
Eutrema salsugineum Thhalv10015259m.g KOG2111 - Uncharacterized conserved protein, contains WD40 repeats scaffold_2 - View
Eutrema salsugineum Thhalv10016737m.g PTHR11227:SF25 - AUTOPHAGY-RELATED PROTEIN 18C-RELATED scaffold_10 + View
Eutrema salsugineum Thhalv10006031m.g PTHR11227:SF25 - AUTOPHAGY-RELATED PROTEIN 18C-RELATED scaffold_19 - View
Fragaria x ananassa FAN10G1421 Fvb7-1 - View
Fragaria x ananassa FAN01G0501 Fvb7-4 - View
Fragaria x ananassa FAN06G2228 Fvb7-2 + View
Fragaria vesca FvH4_7g26300 Fvb7 + View
Gossypium hirsutum Gohir.D05G278600 KOG2111 - Uncharacterized conserved protein, contains WD40 repeats D05 - View
Gossypium hirsutum Gohir.A05G276900 KOG2111 - Uncharacterized conserved protein, contains WD40 repeats A05 - View
Glycine max Glyma.04G224300 PTHR11227:SF25 - AUTOPHAGY-RELATED PROTEIN 18C-RELATED Gm04 + View
Glycine max Glyma.06G140400 PTHR11227:SF25 - AUTOPHAGY-RELATED PROTEIN 18C-RELATED Gm06 - View
Lupinus albus Lalb_Chr11g0067621 Lalb_Chr11 - View
Lonicera japonica Lj1C970T3 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_8_11281 Lsat_1_v8_lg_8 - View
Malus domestica MD07G1238000 homolog of yeast autophagy 18C Chr07 + View
Malus domestica MD01G1171900 homolog of yeast autophagy 18C Chr01 + View
Medicago truncatula Medtr3g093590 WD repeat phosphoinositide-interacting-like protein chr3 + View
Punica granatum PGR044G0272 NC_045134.1 + View
Prunus persica Prupe.2G267100 PTHR11227:SF25 - AUTOPHAGY-RELATED PROTEIN 18C-RELATED Pp02 + View
Populus trichocarpa Potri.019G062800 Chr19 + View
Phaseolus vulgaris Phvul.009G041700 PTHR11227:SF25 - AUTOPHAGY-RELATED PROTEIN 18C-RELATED Chr09 - View
Quercus lobata QL08p065270 8 + View
Rosa chinensis RcHm_v2.0_Chr1g0372741 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim03G0154500 chr03 + View
Rhododendron simsii Rhsim09G0187200 chr09 + View
Striga asiatica SGA_v2.0_scaffold60G20872 scaffold60 - View
Salix brachista Sabra19G0076200 GWHAAZH00000019 + View
Simmondsia chinensis Sc10g0003110 GWHAASQ00000010 + View
Schrenkiella parvula Sp4g23130 ch4-6 + View
Schrenkiella parvula Sp5g06070 ch5-1 + View
Selenicereus undatus Hund13428 Scaffold_33679 - View
Trochodendron aralioides TAR636G2932 group1 - View
Theobroma cacao Thecc.10G187100 Autophagy 18C Chromosome_10 + View
Tarenaya hassleriana THA.LOC104803217 autophagy-related protein 18c-like NW_010970652.1 - View
Tarenaya hassleriana THA.LOC104816502 autophagy-related protein 18e NW_010965775.1 - View
Tripterygium wilfordii TWI09G1086 NC_052245.1 - View
Vaccinium macrocarpon vmacro09947 Similar to ATG18D: Autophagy-related protein 18d (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro06875 Similar to ATG18D: Autophagy-related protein 18d (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G0793 CM024072.1 - View