Gene: AT2G40810

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G40810
  • Transcript Identifier AT2G40810.1
  • Gene Type Coding gene
  • Location Chr2 : 17032686-17034338 : positive

Gene Family Information

  • ID HOM05D001050
  • #Genes/#Species 579/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G40810.1
  • symbol ATG18C
  • Alias ATATG18C,homolog of yeast autophagy 18C
  • full_name homolog of yeast autophagy 18C
  • uniprot Q8GYD7

Descriptions

  • Description yeast autophagy-like protein
  • Computational description homolog of yeast autophagy 18C (ATG18C); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) D (TAIR:AT3G56440.1); Has 1429 Blast hits to 1369 proteins in 244 species: Archae - 0; Bacteria - 43; Metazoa - 558; Fungi - 432; Plants - 215; Viruses - 2; Other Eukaryotes - 179 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044804
IBA
Gene Ontologyautophagy of nucleus1
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006914
IEA
GOA Databaseautophagy
GO:0000422
IBA
Gene Ontologyautophagy of mitochondrion1
GO:0034497
IBA
Gene Ontologyprotein localization to phagophore assembly site1
GO:0006497
IBA
Gene Ontologyprotein lipidation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0080025
IBA
Gene Ontologyphosphatidylinositol-3,5-bisphosphate binding1
GO:0032266
IBA
Gene Ontologyphosphatidylinositol-3-phosphate binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0005773
IEA
GOA Databasevacuole
GO:0034045
IEA
GOA Databasephagophore assembly site membrane
GO:0034045
IBA
Gene Ontologyphagophore assembly site membrane1
GO:0005774
IEA
GOA Databasevacuolar membrane
GO:0009507
ISM
Gene Ontologychloroplast
GO:0019898
IBA
Gene Ontologyextrinsic component of membrane1
GO:0005829
IBA
Gene Ontologycytosol1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
19.3.3.5.1.3 Protein homeostasis.autophagy.phagophore expansion.membrane shuttling.ATG9-2-18 membrane-recruiting complex.component ATG18