Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL5G41860 scaffold_5 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G25520 LG-1 + View
Aethionema arabicum Aa31LG10G14060 LG-10 + View
Amaranthus hybridus Ah.13g073310 Sm-like protein LSM36B (AtLSM6B) (U6 snRNA-associated Sm-like protein LSM6B) AmaHy_arrow1_Scaffold_13 - View
Amaranthus hybridus Ah.07g203020 AmaHy_arrow1_Scaffold_7 + View
Arabidopsis thaliana AT3G59810 Small nuclear ribonucleoprotein family protein Small nuclear ribonucleoprotein family protein%3B CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163)%2C Like-Sm ribonucleoprotein (LSM) domain%2C eukaryotic/archaea-type (InterPro:IPR006649)%2C Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920)%3B BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT2G43810.2)%3B Has 1159 Blast hits to 1159 proteins in 301 species: Archae - 313%3B Bacteria - 0%3B Metazoa - 297%3B Fungi - 260%3B Plants - 135%3B Viruses - 0%3B Other Eukaryotes - 154 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT2G43810 Small nuclear ribonucleoprotein family protein Small nuclear ribonucleoprotein family protein%3B CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163)%2C Like-Sm ribonucleoprotein (LSM) domain%2C eukaryotic/archaea-type (InterPro:IPR006649)%2C Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920)%3B BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G59810.1)%3B Has 1180 Blast hits to 1180 proteins in 300 species: Archae - 305%3B Bacteria - 0%3B Metazoa - 337%3B Fungi - 255%3B Plants - 126%3B Viruses - 0%3B Other Eukaryotes - 157 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaC02g10088 ChrC02 + View
Brassica carinata BcaC08g45011 ChrC08 + View
Brassica napus A04p02010 A04 - View
Brassica napus A09p52090 A09 + View
Brassica napus C06p26430 C06 + View
Brassica rapa BraA04t15926Z A04 - View
Brassica rapa BraA07t30128Z A07 + View
Brassica rapa BraA09t40641Z A09 + View
Beta vulgaris EL10Ac3g06124 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) Chr3_EL10_PGA_scaffold7 + View
Corylus avellana Haze_11169 Similar to LSM6B: Sm-like protein LSM36B (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc03_g15060 U6 snRNA-associated Sm-like protein LSm6 chr3 - View
Citrus clementina Ciclev10023071m.g scaffold_3 - View
Carpinus fangiana Cfa008488 Cfa03 + View
Cardamine hirsuta CARHR170150 U6 snRNA-associated Sm-like protein LSm6 Chr5 + View
Carya illinoinensis CiPaw.02G123500 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) Chr02 + View
Carya illinoinensis CiPaw.01G199100 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) Chr01 + View
Chenopodium quinoa AUR62023757 LSM6B: Sm-like protein LSM36B C_Quinoa_Scaffold_2187 - View
Chenopodium quinoa AUR62002431 LSM6B: Sm-like protein LSM36B C_Quinoa_Scaffold_4480 + View
Capsella rubella Carub.0005s2653 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) scaffold_5 + View
Capsella rubella Carub.0004s2635 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) scaffold_4 + View
Daucus carota DCAR_027508 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv18304 GWHABJS00000016 - View
Durio zibethinus Duzib268G1882 NW_019168270.1 - View
Durio zibethinus Duzib151G0738 NW_019167904.1 - View
Eucalyptus grandis Eucgr.L00030 Chr01 + View
Eutrema salsugineum Thhalv10006338m.g scaffold_19 - View
Fragaria x ananassa FAN28G1098 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) Fvb1-1 + View
Fragaria x ananassa FAN23G0186 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) Fvb1-3 - View
Fragaria x ananassa FAN26G2197 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) Fvb1-2 + View
Fragaria vesca FvH4_1g00440 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) Fvb1 - View
Gossypium hirsutum Gohir.A02G007400 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) A02 - View
Gossypium hirsutum Gohir.A09G213620 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) A09 + View
Gossypium hirsutum Gohir.D02G007200 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) D02 - View
Gossypium hirsutum Gohir.D09G212900 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) D09 + View
Gossypium raimondii Gorai.005G008600 Chr05 - View
Gossypium raimondii Gorai.006G232700 Chr06 + View
Malus domestica MD02G1003600 Small nuclear ribonucleoprotein family protein Chr02 - View
Manihot esculenta Manes.05G137535 Chromosome05 + View
Olea europaea Oeu022452.1 chr11 + View
Punica granatum PGR042G3106 NC_045130.1 + View
Prunus persica Prupe.7G267700 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) Pp07 + View
Rosa chinensis RcHm_v2.0_Chr2g0084951 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim02G0086200 chr02 + View
Simmondsia chinensis Sc13g0007390 GWHAASQ00000013 + View
Schrenkiella parvula Sp4g25890 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) ch4-6 + View
Schrenkiella parvula Sp5g03330 K12625 - U6 snRNA-associated Sm-like protein LSm6 (LSM6) ch5-1 - View
Trochodendron aralioides TAR636G2830 group1 - View
Trochodendron aralioides TAR365G0334 group16 - View
Theobroma cacao Thecc.04G161800 Small nuclear ribonucleoprotein family protein Chromosome_4 - View
Tarenaya hassleriana THA.LOC104805002 sm-like protein LSM36B NW_010960187.1 - View
Tarenaya hassleriana THA.LOC104802338 sm-like protein LSM36B NW_010970490.1 + View
Vitis vinifera GSVIVG01038197001 chr5 + View