Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL8G36720 scaffold_8 + View
AL5G36100 scaffold_5 - View
AL4G36560 scaffold_4 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G14940 LG-4 - View
Aethionema arabicum Aa31LG5G7670 LG-5 + View
Acer truncatum Atru.chr3.3739 chr3 - View
Actinidia chinensis Actinidia05276 Lachesis_group20 - View
Actinidia chinensis Actinidia07098 Lachesis_group13 + View
Actinidia chinensis Actinidia37282 Lachesis_group24 + View
Actinidia chinensis Actinidia13113 Lachesis_group0 + View
Actinidia chinensis Actinidia03756 Lachesis_group9 + View
Avicennia marina MSTRG.10295 ScioBoG_13798_HRSCAF_13862 + View
Avicennia marina MSTRG.21157 ScioBoG_26769_HRSCAF_26899 - View
Avicennia marina MSTRG.8162 ScioBoG_102841_HRSCAF_103114 + View
Avicennia marina MSTRG.12619 ScioBoG_17730_HRSCAF_17811 - View
Aquilegia oxysepala Aqoxy4G03170 CHR04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K6QUG2 K09284 - AP2-like factor, euAP2 lineage (AP2) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QEK7F9 K09284 - AP2-like factor, euAP2 lineage (AP2) arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YSN9W3 K09284 - AP2-like factor, euAP2 lineage (AP2) arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KDI7TH PTHR32467//PTHR32467:SF29 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 arahy.Tifrunner.gnm1.Arahy.08 + View
Arabidopsis thaliana AT3G54990 Integrase-type DNA-binding superfamily protein Encodes a AP2 domain transcription factor that can repress flowering. SMZ and its paralogous gene%2C SNARCHZAPFEN (SNZ)%2C share a signature with partial complementarity to the miR172 microRNA%2C whose precursor is induced upon flowering. SCHLAFMUTZE (SMZ)%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G39250.1)%3B Has 4731 Blast hits to 4226 proteins in 234 species: Archae - 0%3B Bacteria - 32%3B Metazoa - 0%3B Fungi - 0%3B Plants - 4627%3B Viruses - 15%3B Other Eukaryotes - 57 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT2G28550 related to AP2.7 related to AP2.7 (RAP2.7)%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1)%3B Has 4895 Blast hits to 4529 proteins in 234 species: Archae - 0%3B Bacteria - 28%3B Metazoa - 0%3B Fungi - 0%3B Plants - 4802%3B Viruses - 9%3B Other Eukaryotes - 56 (source: NCBI BLink). related to AP2.7 (RAP2.7)%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 (TAIR:AT5G60120.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT2G39250 Integrase-type DNA-binding superfamily protein Encodes a AP2 domain transcription factor that can repress flowering. SNZ and its paralogous gene%2C SCHLAFMUTZE (SMZ)%2C share a signature with partial complementarity to the miR172 microRNA%2C whose precursor is induced upon flowering. SCHNARCHZAPFEN (SNZ)%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G54990.1)%3B Has 4792 Blast hits to 4254 proteins in 261 species: Archae - 0%3B Bacteria - 31%3B Metazoa - 43%3B Fungi - 6%3B Plants - 4636%3B Viruses - 12%3B Other Eukaryotes - 64 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB02g10171 ChrB02 - View
Brassica carinata BcaB01g03108 ChrB01 - View
Brassica carinata BcaC01g04982 ChrC01 - View
Brassica carinata BcaC02g10976 ChrC02 - View
Brassica napus A10p17270 A10 + View
Brassica napus C03p31440 C03 + View
Brassica napus C04p22720 C04 + View
Brassica napus A03p26310 A03 + View
Brassica napus C08p30220 C08 - View
Brassica napus A07p19090 A07 - View
Brassica oleracea BolC3t15492H C3 + View
Brassica oleracea BolC4t23771H C4 + View
Brassica rapa BraA07t29616Z A07 - View
Brassica rapa BraA03t11845Z A03 + View
Camellia sinensis var. sinensis CSS0013012 PREDICTED: ethylene-responsive transcription factor RAP2-7-like isoform X1 [Nelumbo nucifera] Chr1 - View
Camellia sinensis var. sinensis CSS0041049 PREDICTED: ethylene-responsive transcription factor RAP2-7 isoform X1 [Vitis vinifera] Chr11 - View
Capsicum annuum CAN.G84.33 PGAv.1.6.scaffold84 + View
Cannabis sativa CANSAT54G2745 NC_044375.1 + View
Cicer arietinum L. Ca_08819_v3 Ca_LG3_v3 + View
Cicer arietinum L. Ca_19231_v3 Ca_LG6_v3 + View
Corylus avellana Haze_23954 Similar to RAP2-7: Ethylene-responsive transcription factor RAP2-7 (Arabidopsis thaliana OX%3D3702) 6 - View
Coffea canephora Cc01_g11840 Putative Ethylene-responsive transcription factor RAP2-7 chr1 - View
Citrus clementina Ciclev10028259m.g scaffold_8 - View
Ceratophyllum demersum CDE07G0424 5 + View
Cardamine hirsuta CARHR273760 AP2-like ethylene-responsive transcription factor Chr8 + View
Cardamine hirsuta CARHR121560 AP2-like ethylene-responsive transcription factor Chr4 - View
Cardamine hirsuta CARHR164990 AP2-like ethylene-responsive transcription factor Chr5 - View
Carya illinoinensis CiPaw.14G076000 K09284 - AP2-like factor, euAP2 lineage (AP2) Chr14 + View
Carya illinoinensis CiPaw.13G104700 PTHR32467:SF29 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 Chr13 + View
Carya illinoinensis CiPaw.02G177200 PTHR32467//PTHR32467:SF29 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 Chr02 - View
Citrullus lanatus ClCG02G020780 AP2-like ethylene-responsive transcription factor CG_Chr02 - View
Citrullus lanatus ClCG10G020620 AP2-like ethylene-responsive transcription factor CG_Chr10 - View
Cucumis melo MELO3C025726.2 AP2-like ethylene-responsive transcription factor chr11 - View
Cucumis melo MELO3C009307.2 Ethylene-responsive transcription factor chr04 - View
Carica papaya Cpa.g.sc139.43 supercontig_139 + View
Capsella rubella Carub.0004s0952 PTHR32467//PTHR32467:SF29 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 scaffold_4 - View
Cucumis sativus L. CsaV3_6G021830 Ethylene-responsive transcription factor rap2-7 chr6 + View
Daucus carota DCAR_018848 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_005288 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv06353 GWHABJS00000007 - View
Durio zibethinus Duzib128G2027 NW_019168481.1 - View
Durio zibethinus Duzib150G0277 NW_019167882.1 - View
Durio zibethinus Duzib170G0154 NW_019167871.1 + View
Erigeron canadensis ECA238G0532 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA236G0400 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.J02113 Chr10 + View
Eucalyptus grandis Eucgr.B02453 Chr02 + View
Erythranthe guttata Migut.N02639 scaffold_14 - View
Eutrema salsugineum Thhalv10016626m.g scaffold_10 - View
Eutrema salsugineum Thhalv10010513m.g K09284 - AP2-like factor, euAP2 lineage (AP2) scaffold_16 + View
Fragaria x ananassa FAN25G3461 PTHR32467:SF29 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 Fvb3-1 - View
Fragaria x ananassa FAN11G1484 K09284 - AP2-like factor, euAP2 lineage (AP2) Fvb3-4 + View
Gossypium hirsutum Gohir.A08G000092 PTHR32467//PTHR32467:SF28//PTHR32467:SF29 - FAMILY NOT NAMED // SUBFAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 A08 - View
Gossypium hirsutum Gohir.D03G132700 PTHR32467//PTHR32467:SF29 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 D03 + View
Gossypium hirsutum Gohir.D01G206600 K09284 - AP2-like factor, euAP2 lineage (AP2) D01 - View
Gossypium hirsutum Gohir.A05G100400 K09284 - AP2-like factor, euAP2 lineage (AP2) A05 + View
Gossypium hirsutum Gohir.A01G217700 K09284 - AP2-like factor, euAP2 lineage (AP2) A01 - View
Gossypium hirsutum Gohir.D08G008900 K09284 - AP2-like factor, euAP2 lineage (AP2) D08 - View
Gossypium hirsutum Gohir.A03G035500 K09284 - AP2-like factor, euAP2 lineage (AP2) A03 - View
Gossypium hirsutum Gohir.D05G100200 K09284 - AP2-like factor, euAP2 lineage (AP2) D05 + View
Glycine max Glyma.13G329700 PTHR32467//PTHR32467:SF29 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 Gm13 - View
Glycine max Glyma.15G044400 PTHR32467//PTHR32467:SF29 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 Gm15 + View
Glycine max Glyma.12G073300 PTHR32467//PTHR32467:SF29 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 Gm12 - View
Glycine max Glyma.03G177500 K09284 - AP2-like factor, euAP2 lineage (AP2) Gm03 + View
Glycine max Glyma.11G149825 PTHR32467//PTHR32467:SF29 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 Gm11 + View
Glycine max Glyma.19G178200 K09284 - AP2-like factor, euAP2 lineage (AP2) Gm19 + View
Gossypium raimondii Gorai.003G139800 Chr03 + View
Gossypium raimondii Gorai.009G104200 Chr09 + View
Gossypium raimondii Gorai.004G002100 Chr04 - View
Lupinus albus Lalb_Chr14g0374861 K09284 - AP2-like factor, euAP2 lineage (AP2) Lalb_Chr14 - View
Lupinus albus Lalb_Chr24g0394401 PTHR32467//PTHR32467:SF29 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 Lalb_Chr24 + View
Lupinus albus Lalb_Chr19g0137541 K09284 - AP2-like factor, euAP2 lineage (AP2) Lalb_Chr19 - View
Lupinus albus Lalb_Chr25g0289271 K09284 - AP2-like factor, euAP2 lineage (AP2) Lalb_Chr25 - View
Lotus japonicus Lj3g0017388 K09284 - AP2-like factor, euAP2 lineage (AP2) chr3 + View
Lotus japonicus Lj1g0005547 K09284 - AP2-like factor, euAP2 lineage (AP2) chr1 - View
Lonicera japonica Lj2A106T34 GWHAAZE00000002 + View
Lonicera japonica Lj3C978G3 GWHAAZE00000003 + View
Lonicera japonica Lj2A1042T47 GWHAAZE00000002 - View
Lonicera japonica Lj1A181T23 GWHAAZE00000001 + View
Malus domestica MD03G1107900 related to AP2.7 Chr03 + View
Malus domestica MD11G1121200 related to AP2.7 Chr11 + View
Manihot esculenta Manes.04G027000 Chromosome04 - View
Manihot esculenta Manes.11G139300 Chromosome11 + View
Medicago truncatula Medtr2g093060 AP2-like ethylene-responsive transcription factor chr2 + View
Medicago truncatula Medtr4g061200 AP2-like ethylene-responsive transcription factor chr4 - View
Nelumbo nucifera Nn2g12971 chr2 + View
Olea europaea Oeu058501.1 chr22 - View
Punica granatum PGR142G3624 NC_045128.1 - View
Punica granatum PGR004G1724 NC_045131.1 - View
Prunus persica Prupe.6G091100 Pp06 + View
Phaseolus vulgaris Phvul.001G174400 K09284 - AP2-like factor, euAP2 lineage (AP2) Chr01 + View
Phaseolus vulgaris Phvul.011G071100 PTHR32467:SF29 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 Chr11 + View
Quercus lobata QL01p035865 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0061491 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0090400 chr13 + View
Rhododendron simsii Rhsim01G0221900 chr01 - View
Striga asiatica SGA_v2.0_scaffold94G28662 scaffold94 + View
Striga asiatica SGA_v2.0_scaffold35G14172 scaffold35 - View
Salvia bowleyana SalBow3G2198 GWHASIU00000006 - View
Salvia bowleyana SalBow3G3067 GWHASIU00000006 + View
Salix brachista Sabra08G0031500 GWHAAZH00000008 - View
Salix brachista Sabra10G0167300 GWHAAZH00000010 + View
Sechium edule Sed0001546 LG04 + View
Sechium edule Sed0014820 LG07 - View
Sechium edule Sed0000924 LG05 + View
Solanum lycopersicum Solyc06g075510.4 APETALA2e SL4.0ch06 - View
Solanum lycopersicum Solyc11g072600.3 APETALA2d SL4.0ch11 - View
Schrenkiella parvula Sp4g11380 PTHR32467:SF29 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 ch4-6 - View
Schrenkiella parvula Sp6g21770 PTHR32467:SF15 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED ch6-6 + View
Schrenkiella parvula Sp5g07440 PTHR32467:SF15 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED ch5-1 + View
Solanum pennellii Sopen06g031890 related to AP2.7 (RAP2.7) | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 ., Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) Spenn-ch06 - View
Solanum pennellii Sopen11g030250 related to AP2.7 (RAP2.7) | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 ., Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape) Spenn-ch11 - View
Solanum tuberosum PGSC0003DMG400006604 Apetala 2 ST4.03ch06 - View
Trochodendron aralioides TAR623G1691 group7 - View
Theobroma cacao Thecc.09G336100 AP2.7 Chromosome_9 + View
Tarenaya hassleriana THA.LOC104800621 ethylene-responsive transcription factor RAP2-7 isoform X1 NW_010969548.1 - View
Tarenaya hassleriana THA.LOC104799479 AP2-like ethylene-responsive transcription factor TOE2 NW_010968505.1 + View
Tripterygium wilfordii TWI38G0877 NC_052252.1 - View
Tripterygium wilfordii TWI79G0541 NC_052238.1 + View
Tripterygium wilfordii TWI31G0284 NC_052233.1 + View
Vaccinium macrocarpon vmacro14485 Similar to AP2-1: APETALA2-like protein 1 (Oryza sativa subsp. indica OX%3D39946) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro03145 Similar to RAP2-7: Ethylene-responsive transcription factor RAP2-7 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1127G0969 CM024076.1 + View
Vigna mungo VMungo1080G1840 CM024079.1 + View
Vitis vinifera GSVIVG01025548001 chr8 - View
Vitis vinifera GSVIVG01025100001 chr6 - View
Zea mays Zm00001eb062460 Zm00001e006172 AP2-EREBP transcription factor tasselseed6 1 + View