Gene: Sopen11g030250
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g030250
- Transcript Identifier Sopen11g030250.2
- Gene Type Coding gene
- Location Spenn-ch11 : 65633752-65636717 : negative
Gene Family Information
- ID HOM05D000138
- #Genes/#Species 2624/100
- Phylogenetic origin
- ID ORTHO05D000078
- #Genes/#Species 2400/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g030250.2
Descriptions
- Description related to AP2.7 (RAP2.7) | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 2 ., Protein BABY BOOM 1 (BnBBM1) - Brassica napus (Rape)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0010629 | ISO | PLAZA Integrative Orthology | negative regulation of gene expression | AT2G28550 |
| GO:0071369 | ISO | PLAZA Integrative Orthology | cellular response to ethylene stimulus | Solyc11g072600.3 |
| GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT2G28550 |
| GO:0045824 | ISO | PLAZA Integrative Orthology | negative regulation of innate immune response | AT2G28550 |
| GO:1905392 | ISO | PLAZA Integrative Orthology | plant organ morphogenesis | AT2G28550 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc11g072600.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G39250 |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT2G28550 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G39250 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G39250 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.7.3 | RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (AP2) |