Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G31900 scaffold_1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G4010 LG-7 - View
Acer truncatum Atru.chr13.552 chr13 + View
Actinidia chinensis Actinidia22568 Lachesis_group28 + View
Actinidia chinensis Actinidia15298 Lachesis_group26 + View
Aquilegia oxysepala Aqoxy6G01006 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P4T07M PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.17 + View
Arabidopsis thaliana AT1G74990 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 16 plant structures%3B EXPRESSED DURING: 4 anthesis%2C F mature embryo stage%2C 4 leaf senescence stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G19310.1)%3B Has 4144 Blast hits to 4137 proteins in 330 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2459%3B Fungi - 476%3B Plants - 747%3B Viruses - 18%3B Other Eukaryotes - 444 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G19310 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G23780.1)%3B Has 4673 Blast hits to 4665 proteins in 300 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2731%3B Fungi - 589%3B Plants - 822%3B Viruses - 25%3B Other Eukaryotes - 500 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC08g46931 ChrC08 - View
Brassica carinata BcaB07g31965 ChrB07 + View
Brassica napus A07p40620 A07 - View
Brassica napus C05p17690 C05 - View
Brassica napus A06p15440 A06 - View
Brassica napus C06p48990 C06 - View
Brassica oleracea BolC6t39936H C6 - View
Brassica oleracea BolC5t30474H C5 - View
Brassica rapa BraA06t24657Z A06 - View
Brassica rapa BraA07t31606Z A07 - View
Camellia sinensis var. sinensis CSS0034911 PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Nelumbo nucifera] Chr9 + View
Cannabis sativa CANSAT25G0879 NC_044370.1 - View
Cicer arietinum L. Ca_24828_v3 Ca_LG8_v3 - View
Corylus avellana Haze_17621 Similar to RMA1: E3 ubiquitin-protein ligase RMA1 (Arabidopsis thaliana OX%3D3702) 7 - View
Coffea canephora Cc10_g03400 Putative E3 ubiquitin-protein ligase RMA1H1 chr10 + View
Citrus clementina Ciclev10002367m.g scaffold_5 - View
Cardamine hirsuta CARHR019900 RING finger protein Chr1 - View
Cardamine hirsuta CARHR068300 RING finger protein 5 Chr2 - View
Carya illinoinensis CiPaw.15G072100 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED Chr15 - View
Citrullus lanatus ClCG08G015390 RING finger protein CG_Chr08 + View
Cucumis melo MELO3C010916.2 RING finger protein 5 chr03 + View
Carica papaya Cpa.g.sc64.44 supercontig_64 - View
Capsella rubella Carub.0002s2177 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED scaffold_2 - View
Capsella rubella Carub.0001s1890 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED scaffold_1 - View
Cucumis sativus L. CsaV3_2G028400 RING-finger-containing E3 ubiquitin ligase chr2 - View
Davidia involucrata Dinv39380 GWHABJS00000011 - View
Davidia involucrata Dinv42092 GWHABJS00000002 - View
Davidia involucrata Dinv36039 GWHABJS00000002 - View
Davidia involucrata Dinv23557 GWHABJS00000005 + View
Durio zibethinus Duzib041G0402 NW_019167826.1 + View
Durio zibethinus Duzib093G2241 NW_019167937.1 - View
Durio zibethinus Duzib116G0145 NW_019167949.1 + View
Durio zibethinus Duzib187G1268 NW_019167860.1 - View
Eucalyptus grandis Eucgr.A00486 Chr06 + View
Erythranthe guttata Migut.C00681 scaffold_3 - View
Erythranthe guttata Migut.B00269 scaffold_2 + View
Eutrema salsugineum Thhalv10008430m.g PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED scaffold_5 + View
Eutrema salsugineum Thhalv10019588m.g PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED scaffold_9 + View
Fragaria x ananassa FAN27G3046 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED Fvb2-1 + View
Fragaria vesca FvH4_2g40351 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED Fvb2 + View
Gossypium hirsutum Gohir.D03G017500 PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED D03 + View
Gossypium hirsutum Gohir.A06G012300 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED A06 + View
Gossypium hirsutum Gohir.A01G117400 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED A01 + View
Gossypium hirsutum Gohir.A02G162800 PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED A02 - View
Gossypium hirsutum Gohir.D12G066600 PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED D12 + View
Gossypium hirsutum Gohir.D01G105700 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED D01 + View
Gossypium hirsutum Gohir.D06G009700 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED D06 + View
Glycine max Glyma.04G034500 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED Gm04 + View
Gossypium raimondii Gorai.003G017800 Chr03 + View
Gossypium raimondii Gorai.008G069900 Chr08 + View
Gossypium raimondii Gorai.010G012500 Chr10 + View
Hydrangea macrophylla Hma1.2p1_0203F.1_g086750 Hma1.2p1_0203F.1 + View
Lupinus albus Lalb_Chr14g0369041 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED Lalb_Chr14 - View
Lupinus albus Lalb_Chr23g0266721 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED Lalb_Chr23 + View
Lupinus albus Lalb_Chr05g0213021 PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED Lalb_Chr05 + View
Lotus japonicus Lj5g0002007 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED chr5 - View
Lotus japonicus Lj2g0015558 PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED chr2 - View
Lonicera japonica Lj4E783T0 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_1_18521 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED Lsat_1_v8_lg_1 + View
Malus domestica MD08G1036700 RING/U-box superfamily protein Chr08 + View
Manihot esculenta Manes.05G163900 Chromosome05 + View
Medicago truncatula Medtr1g021895 zinc finger, C3HC4 type (RING finger) protein chr1 - View
Punica granatum PGR102G0197 NC_045129.1 + View
Prunus persica Prupe.1G384000 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED Pp01 + View
Populus trichocarpa Potri.014G040400 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED Chr14 - View
Populus trichocarpa Potri.007G031600 PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED Chr07 + View
Populus trichocarpa Potri.002G133000 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED Chr02 - View
Phaseolus vulgaris Phvul.009G055700 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED Chr09 - View
Quercus lobata QL02p007320 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0300391 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim07G0235100 chr07 - View
Salix brachista Sabra14G0029500 GWHAAZH00000014 - View
Sechium edule Sed0010082 LG11 - View
Solanum lycopersicum Solyc01g109340.4 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G3D341_CAPCH) SL4.0ch01 - View
Schrenkiella parvula Sp5g30120 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED ch5-7 - View
Schrenkiella parvula Sp1g17210 PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED ch1-1 - View
Solanum pennellii Sopen01g051530 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400025183 Rnf5 ST4.03ch01 - View
Trochodendron aralioides TAR628G1352 group5 - View
Theobroma cacao Thecc.08G021700 Chromosome_8 - View
Tripterygium wilfordii TWI56G0222 NC_052242.1 - View
Tripterygium wilfordii TWI12G0515 NC_052243.1 + View
Vaccinium macrocarpon vmacro04498 Similar to rnf-5: E3 ubiquitin ligase rnf-5 (Caenorhabditis elegans OX%3D6239) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G1377 CM024072.1 - View
Vitis vinifera GSVIVG01009643001 chr18 - View