Gene: AT1G74990

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G74990
  • Transcript Identifier AT1G74990.1
  • Gene Type Coding gene
  • Location Chr1 : 28159837-28160250 : negative

Gene Family Information

  • ID HOM05D000463
  • #Genes/#Species 1137/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G74990.1
  • uniprot Q9S7D6

Descriptions

  • Description RING/U-box superfamily protein
  • Computational description RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G19310.1); Has 4144 Blast hits to 4137 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 2459; Fungi - 476; Plants - 747; Viruses - 18; Other Eukaryotes - 444 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071712
IBA
Gene OntologyER-associated misfolded protein catabolic process1
GO:0006511
IEA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0006511
IBA
Gene Ontologyubiquitin-dependent protein catabolic process1
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044390
IBA
Gene Ontologyubiquitin-like protein conjugating enzyme binding1
GO:0061630
IEA
GOA Databaseubiquitin protein ligase activity
GO:0061630
IBA
Gene Ontologyubiquitin protein ligase activity1
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005783
IEA
Gene Ontologyendoplasmic reticulum
GO:0005783
IEA
InterProendoplasmic reticulum

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018957 Zinc finger, C3HC4 RING-type
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR045103 E3 ubiquitin-protein ligase RNF5/RNF185-like
Mapman id Description
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase