Gene: vmacro04498

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro04498
  • Transcript Identifier vmacro04498-RA
  • Gene Type Coding gene
  • Location chr12_Vaccinium_macrocarpon_Stevens_v1 : 2615171-2615869 : positive

Gene Family Information

  • ID HOM05D000463
  • #Genes/#Species 1137/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro04498_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to rnf-5: E3 ubiquitin ligase rnf-5 (Caenorhabditis elegans OX=6239)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0042277
ISO
PLAZA Integrative Orthologypeptide binding AT2G23780

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IEA
InterProendoplasmic reticulum

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045103 E3 ubiquitin-protein ligase RNF5/RNF185-like
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase