Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
C09p21120 C09 - View
A01p29650 A01 + View
C01p37460 C01 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G9660 LG-2 - View
Arabidopsis lyrata AL2G15600 scaffold_2 - View
Arabidopsis thaliana AT1G60830 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B EXPRESSED IN: male gametophyte%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor%2C large subunit%2C splicing factor (TAIR:AT1G60900.1)%3B Has 998 Blast hits to 990 proteins in 185 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 494%3B Fungi - 152%3B Plants - 178%3B Viruses - 0%3B Other Eukaryotes - 174 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC09g49359 ChrC09 - View
Brassica carinata BcaC04g22269 ChrC04 - View
Brassica carinata BcaB04g20291 ChrB04 + View
Brassica carinata BcaB07g31242 ChrB07 + View
Brassica oleracea BolC1t03714H C1 + View
Brassica oleracea BolC9t55013H C9 - View
Brassica oleracea BolC9t55050H C9 + View
Brassica rapa BraA09t37342Z A09 - View
Beta vulgaris EL10Ac8g20355 PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr8_EL10_PGA_scaffold4 - View
Camellia sinensis var. sinensis CSS0007547 PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera] Chr8 - View
Corylus avellana Haze_06498 Similar to U2AF65B: Splicing factor U2af large subunit B (Nicotiana plumbaginifolia OX%3D4092) 2 + View
Carpinus fangiana Cfa000418 Cfa01 - View
Cardamine hirsuta CARHR051940 Splicing factor U2af large subunit A Chr2 + View
Carica papaya Cpa.g.sc27.62 supercontig_27 + View
Chenopodium quinoa AUR62014796 U2AF65B: Splicing factor U2af large subunit B C_Quinoa_Scaffold_2947 - View
Capsella rubella Carub.0002s0439 PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED scaffold_2 - View
Davidia involucrata Dinv07539 GWHABJS00000020 + View
Eutrema salsugineum Thhalv10023361m.g scaffold_8 - View
Fragaria x ananassa FAN21G2391 PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb3-2 + View
Fragaria vesca FvH4_3g04890 PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb3 - View
Lotus japonicus Lj6g0012533 K12837 - splicing factor U2AF 65 kDa subunit (U2AF2) chr6 + View
Malus domestica MD10G1296400 U2 snRNP auxilliary factor Chr10 + View
Malus domestica MD05G1315100 U2 snRNP auxilliary factor Chr05 + View
Prunus persica Prupe.4G044200 Pp04 - View
Populus trichocarpa Potri.011G050400 PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr11 - View
Salix brachista Sabra04G0025300 GWHAAZH00000004 - View
Salix brachista Sabra11G0034400 GWHAAZH00000011 - View
Solanum lycopersicum Solyc02g078490.3 splicing factor U2af large subunit A isoform X1 (AHRD V3.3 *** XP_010316737.1) SL4.0ch02 + View
Schrenkiella parvula Sp2g03730 PTHR23139//PTHR23139:SF62 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED ch2-2 - View
Solanum pennellii Sopen02g023340 U2 snRNP auxilliary factor, large subunit, splicing factor | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: mRNA processing | LOCATED IN: nucleus | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait , U2 snRNP auxilliary factor, large subunit, splicing factor | BEST Arabidopsis thaliana protein match is: U2 snRNP auxilliary factor, large subunit, splicing factor Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400022438 Splicing factor U2af large subunit B ST4.03ch02 + View
Tarenaya hassleriana THA.LOC104819211 splicing factor U2af large subunit B isoform X1 NW_010960187.1 - View